| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_E0004 |
|---|
| Symbol | thrC |
|---|
| ID | 6273236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shigella boydii CDC 3083-94 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010658 |
|---|
| Strand | + |
|---|
| Start bp | 3733 |
|---|
| End bp | 5019 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641724265 |
|---|
| Product | threonine synthase |
|---|
| Protein accession | YP_001878825 |
|---|
| Protein GI | 187732437 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0498] Threonine synthase |
|---|
| TIGRFAM ID | [TIGR00260] threonine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.412725 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCT ACAATCTGAA AGATCACAAT GAGCGGGTCA GCTTTGCGCA AGCCGTAACC
CAGGGGTTGG GCAAAAATCA GGGGCTGTTT TTTCCGCACG ACCTGCCGGA ATTCAGCCTG
ACTGAAATTG ATGAGATGCT GAAGCTGGAT TTTGTCACCC GCAGTGCGAA GATCCTCTCG
GCGTTTATTG GTGATGAAAT CCCGCAGGAA ATCCTGGAAG AGCGCGTGCG CGCGGCGTTT
GCCTTCCCGG CTCCGGTCGC CAATGTTGAA AGCGATGTCG GTTGTCTGGA ATTGTTCCAC
GGGCCAACGC TGGCATTTAA AGATTTCGGC GGTCGCTTTA TGGCACAAAT GCTGACCCAT
ATTGCGGGCG ATAAGCCAGT GACCATTCTG ACCGCGACCT CCGGTGATAC CGGAGCGGCA
GTGGCTCATG CTTTCTACGG TTTACCGAAT GTGAAAGTGG TTATCCTCTA TCCACGAGGC
AAAATCAGTC CACTGCAAGA AAAACTGTTC TGTACATTGG GCGGCAATAT CGAAACTGTT
GCCATCGACG GCGATTTCGA TGCCTGTCAG GCGCTGGTGA AGCAGGCGTT TGATGATGAA
GAGCTGAAAG TGGCGCTGGG GTTAAACTCA GCTAACTCGA TTAACATCAG CCGTTTGCTG
GCGCAGATTT GCTACTACTT TGAAGCAGTT GCGCAGCTGC CGCAGGAAGC GCGCAACCAG
CTGGTTGTCT CGGTGCCAAG CGGAAACTTC GGCGATTTGA CGGCGGGTCT GCTGGCGAAG
TCACTCGGTC TGCCGGTGAA ACGTTTTATT GCTGCGACCA ACGTGAACGA TACCGTGCCA
CGTTTCCTGC ACGACGGTCA GTGGTCACCC AAAGCGACTC AGGCGACGTT ATCCAACGCG
ATGGACGTGA GTCAGCCGAA CAACTGGCCG CGTGTGGAAG AGTTGTTCCG CCGCAAAATC
TGGCAACTGA AAGAGCTGGG TTATGCAGCC GTGGATGATG AAACCACGCA ACAGACAATG
CGTGAGTTAA AAGAACTGGG CTACACCTCG GAGCCGCACG CTGCCGTAGC GTATCGTGCG
CTGCGTGACC AGTTGAATCC AGGCGAATAT GGCTTGTTCC TCGGCACCGC GCATCCGGCG
AAATTTAAAG AGAGCGTGGA AGCGATTCTC GGTGAAACGT TGGATCTGCC AAAAGAGCTG
GCAGAACGTG CTGATTTACC CTTGCTTTCA CATAATCTGC CCGCCGATTT TGCTGCGTTG
CGTAAATTGA TGATGAATCA TCAGTAA
|
|---|
| Protein sequence | MKLYNLKDHN ERVSFAQAVT QGLGKNQGLF FPHDLPEFSL TEIDEMLKLD FVTRSAKILS
AFIGDEIPQE ILEERVRAAF AFPAPVANVE SDVGCLELFH GPTLAFKDFG GRFMAQMLTH
IAGDKPVTIL TATSGDTGAA VAHAFYGLPN VKVVILYPRG KISPLQEKLF CTLGGNIETV
AIDGDFDACQ ALVKQAFDDE ELKVALGLNS ANSINISRLL AQICYYFEAV AQLPQEARNQ
LVVSVPSGNF GDLTAGLLAK SLGLPVKRFI AATNVNDTVP RFLHDGQWSP KATQATLSNA
MDVSQPNNWP RVEELFRRKI WQLKELGYAA VDDETTQQTM RELKELGYTS EPHAAVAYRA
LRDQLNPGEY GLFLGTAHPA KFKESVEAIL GETLDLPKEL AERADLPLLS HNLPADFAAL
RKLMMNHQ
|
|---|
| |