Gene SbBS512_0052 details

Gene Information

• Locus tag: SbBS512_0052
• ID: 6268331
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shigella boydii CDC 3083-94
• Kingdom: Bacteria
• Replicon accession: NC_010657
• Strand: +
• Start bp: 31921
• End bp: 32415
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 641724260
• Product: protein ParB
• Protein accession: YP_001878820
• Protein GI: 187729985
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1525] Micrococcal nuclease (thermonuclease) homologs

Plasmid Coverage information

• Num covering plasmid clones: 136
• Plasmid unclonability p-value: 0.0810303
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACATT TTCTTAAGGC TCTTTCCTTT GTTGTTTCCC TGTTACCAGC TACATTGTGT 
GCGGCTGAAA TCCAGGGGAA AGTTATTCGC GTTCTCGATG GCGACACCAT AGAAGTTAAA 
ACACTACCCG CAAAAATTGT TGTGTATGAA GTTCCGATTC GAGTCCGATT GATAAATATT 
GATGCCCCTG AAAAGAAACA ACCTTTTGGA CGCTGGTCAA CAAATCAACT TAAAACCCTG 
CTCGCAGGCC AATCCGTTAC CGTCTCTTAT ACGCAGACAG ACCGCTACGG ACGCATTATC 
GGTCGTGTGT TCACGACGAA CGGCACGGAT GCCAGCCGCT TTATGGTTCA GTCTGGCGCT 
GCATGGGTAT ATGAACGTTA CAACGAGGAT GAGTCATTAC CGGCTCTGCA ACGGGAAGCG 
CAGGAACAAA AACGCGGTTT GTGGGCCGAC GCAAATCCAG TTCCACCGTG GGAGTGGCGA 
TACAAACATA ACTAA 

 

Protein sequence

MRHFLKALSF VVSLLPATLC AAEIQGKVIR VLDGDTIEVK TLPAKIVVYE VPIRVRLINI 
DAPEKKQPFG RWSTNQLKTL LAGQSVTVSY TQTDRYGRII GRVFTTNGTD ASRFMVQSGA 
AWVYERYNED ESLPALQREA QEQKRGLWAD ANPVPPWEWR YKHN