Gene SbBS512_0048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0048 
Symbol 
ID6268321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand
Start bp30511 
End bp30930 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content44% 
IMG OID641724256 
Productputative lipoprotein 
Protein accessionYP_001878816 
Protein GI187729986 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones173 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAGT TAGTGTTTTT ATTGATTTCT ATCCTTGCTG GTTGTTCATC ACCGCCAGAG 
CCAACACCCG CGCAGTTTGA AAAGGCAAAT GAAGTGATCA ATCCCTCATT GCCGTATGTC
CCCGATTTTC ACGGCGTCAT AAAGTCAGAA GTTAGCGGTA AAGGATGGGT TTATGAGATC
ACTTCCTTAT CCGGTGTACA GGCCAGAACG CCGACGTTCT ATTACGCTCT GGCTCATGCG
GACAGGGTGG TAGTGACAAC ACATGATGCT GGGCTGTGGT TTCGAATCAG AGATCTGTTG
AAGATGGAAG GGGCAACAGC AGTCGTGGAA TGGCGAAACG AGAAAAGTTT TTTACCTGAA
CAGGTAAAAA TAGTTTTCAT TAAAGCACAA AATGAGGTGA AAAATGACTG GAAAAAATAG
 
Protein sequence
MKKLVFLLIS ILAGCSSPPE PTPAQFEKAN EVINPSLPYV PDFHGVIKSE VSGKGWVYEI 
TSLSGVQART PTFYYALAHA DRVVVTTHDA GLWFRIRDLL KMEGATAVVE WRNEKSFLPE
QVKIVFIKAQ NEVKNDWKK