Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_0045 |
Symbol | |
ID | 6268344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010657 |
Strand | + |
Start bp | 26511 |
End bp | 27620 |
Gene Length | 1110 bp |
Protein Length | 369 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641724253 |
Product | bacterial conjugation TrbI-like protein |
Protein accession | YP_001878813 |
Protein GI | 187730017 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 193 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGATA TGAAAAAAAC AGATGATTTA GTTGATGATG CGAATCAGTC AAAGCTGGAA AGTAAACCCG TTCATGATAT CGGTGATATC AGGAACAAAA ATAATCGTAT GCGTTCTGGC TTTCTGTTTG GTCTGATGGC TGTATTAGTT ATTGGTATTT TTGCGCTGAA AACATATAAA AATTATTTTG CAGATGACCA GCAGAAAGCA TCAGAATCAA CAGGCGATAC CAGCATTTCT CAGGTAAGTA AAATCCGTAC TGGTCTTGGT CAGAATTTTG ACCCTGTTGA GAACAAAGCA ATTATCAATC CAGGCGCTTC TGGTTCTGGT AATACTGTTT CTGACGGTCA TAAAGAAGTG CCACAGGAGG GGTTCAGGAA ATATTTGTCA ATACCTGTTG CTGGTCAGGG AGGGAGTCAG ACTGGCGCGA GTGGCAGCAG CAGGACATCA GAGCCACAGG AAGAAAGGAA AGAATCAAAA GAAAATGTGC CTGGTAAATC AGGAATGAAA GTGACTGCGA TTAATCTCGA TCCTGATCTC TATATTGAGG AAAACAGGCT TATACCGTGT GCTTTAACCA CACGCTTTGT TTCTGATGTT GCAGGTCGTA TCAGTTGTGT TTTTACAGAA GATGTATGGA GTGCTAATCA CCACACAAAA TTACTGGAAC AGGGAACTAA GGCTTTTGGT CGTTACCAGA CCGGAACGCT GAATCATGGA CAGGGCAGAA TGTTCGTTAT GTGGGAGCAG TTGCGGACGC CTGATAATAA ACGAATCGAT ATGGTAAATA CAGCAGCGGC TGGCCCCCTG GGAGAAGCGG GCATTGATGG ATGGATCGAT TCTCACTTCT GGGAGCGTTT TGGTGGTTCT CTTATGCTCA GTATGGTTCA GGATGTAGCG GCTGCGGCGG CGGATAATGC ACCTGGTAAA GATCGTAATG TGGATTATAC CGAAAACTCA CGACAGGCAA TGGCTGAAAT GGCTAAAGTC GCACTTGAGA ATTCGATAAA TATTCCTCCA ACAATGTATA AAAACCAGGG TGACATAATC ACTATTATGG TCGGGGAAGA CATTGATTTT TCTGATATCT ATGAGTTAAA GGTAAAATAG
|
Protein sequence | MTDMKKTDDL VDDANQSKLE SKPVHDIGDI RNKNNRMRSG FLFGLMAVLV IGIFALKTYK NYFADDQQKA SESTGDTSIS QVSKIRTGLG QNFDPVENKA IINPGASGSG NTVSDGHKEV PQEGFRKYLS IPVAGQGGSQ TGASGSSRTS EPQEERKESK ENVPGKSGMK VTAINLDPDL YIEENRLIPC ALTTRFVSDV AGRISCVFTE DVWSANHHTK LLEQGTKAFG RYQTGTLNHG QGRMFVMWEQ LRTPDNKRID MVNTAAAGPL GEAGIDGWID SHFWERFGGS LMLSMVQDVA AAAADNAPGK DRNVDYTENS RQAMAEMAKV ALENSINIPP TMYKNQGDII TIMVGEDIDF SDIYELKVK
|
| |