| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SbBS512_0039 |
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| Symbol | |
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| ID | 6268365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shigella boydii CDC 3083-94 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010657 |
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| Strand | + |
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| Start bp | 23318 |
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| End bp | 24412 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641724247 |
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| Product | TriE protein |
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| Protein accession | YP_001878807 |
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| Protein GI | 187729987 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3704] Type IV secretory pathway, VirB6 components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 195 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTCAGG GTTTTTTCGT TAAATATAAT TCTACCGTTA TGGATTCGGT AGATAAAATC
AGCTCCAGTT ATCAAACACA ATTTGCTAAT GATATTATGT CGTTAGTGAC GGTATCGGTT
ACGTTATATG TACTATGGAA AGGATATCAA ATACTTGCCA GTAAAACTCA GACGCCCTTG
CAGGATTTAG TATGGGATCT ATCAAAATTT GCAATCATAA TCATGTTTAT AACTAATGCG
GATGGGTATT TAACTGCGGC TACTGATGCG TTGCAAGGCA TGAAAGATGG TTTTTCTGGA
GGGGTGAGTG TCTGGCAAAC TTTAGATAAC TTATGGAAAA GTACGCAAAA TCTTGGTGCG
GAAATATACT CTTTAGATAA ATCAACATAT GTTAAAGATC AAGGTGTAGT TGGACAGTTT
TTAATATGGA CTGGCTCGCT TATTTTAATG GCTGTTAGTG TGGTTGTTTT TTTAACAGCA
GATGTAACGA TGAAACTCCT GATTATTACA GCACCGATAT TTATCTTTTG TCTCATGTTT
GGTTTTATTC GGAGCATGTT TAATAATTGG TTACAATCGT TATTCTCCAG TATTCTGACA
GTTCTATTTG CCAGTTTAGT GATTCGGATA GCAATGGATT TTCAAGGGAT GATCCTTTCC
CATGCTATTC GTGCTGCACA AACAGGGAAT GTAAATCTTG TATCTACAGG TGCTATGGGC
TTTATGGCTG GTTTTTTGGG GGCTTTATTG GTTCTTATAG CTAAAGGTTT TGCTGTCCAG
TTAGCAGGTG CAGGTGTTGA AGGTGCTGTT CAGGGCGCAG CCATGATGGG GCTGGGTGCT
GCGGGTATGG CTACTGGTAA GTCTCTGATG CTTGGCGGTC GTGCTGGTTT AGGTTTTGGC
TTAGGGATGG CCGGAAGAAC GGGCATGAAT TCTTTATCAG GGAAAGCAGG GAATCTGATG
GGGCGTGGTG CGAGAACAGC CGCTGAATGG GCGGGTGAAA AGGGATATCA GGCGCTGGCT
CCGACAGGTG CTTTGGGGAT GAAGGCGAGA AGACTTGCAT CCCTGGAAAA AGCACGAGCG
AGGAATGCCG CATGA
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| Protein sequence | MAQGFFVKYN STVMDSVDKI SSSYQTQFAN DIMSLVTVSV TLYVLWKGYQ ILASKTQTPL
QDLVWDLSKF AIIIMFITNA DGYLTAATDA LQGMKDGFSG GVSVWQTLDN LWKSTQNLGA
EIYSLDKSTY VKDQGVVGQF LIWTGSLILM AVSVVVFLTA DVTMKLLIIT APIFIFCLMF
GFIRSMFNNW LQSLFSSILT VLFASLVIRI AMDFQGMILS HAIRAAQTGN VNLVSTGAMG
FMAGFLGALL VLIAKGFAVQ LAGAGVEGAV QGAAMMGLGA AGMATGKSLM LGGRAGLGFG
LGMAGRTGMN SLSGKAGNLM GRGARTAAEW AGEKGYQALA PTGALGMKAR RLASLEKARA
RNAA
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