Gene SbBS512_0038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0038 
Symbol 
ID6268361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand+ 
Start bp22590 
End bp23306 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content40% 
IMG OID641724246 
Producttype IV secretion system VirB5 component 
Protein accessionYP_001878806 
Protein GI187729999 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones197 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGTG TAAAAACATT TATGCTGATA TCATTATTGA CGGCTTCATT TTATAGCAGC 
GCAGGTATTC CGGTTGCTGT AGATGCCAGT CCGGAATGGG CTGTTGAAGC CGCAAGATGG 
ACAGAACGAC TCAAACAATG GTCCGAAACT GCGAAACATT ATCAGGGTCA GATTCAGGCA 
TATAAAGACC AGTTAGCCAC GGCAACAGGT ATAAGGAATA TTGCGGCATT CACAAATGAA 
CTAAGTAATC TGCAATCAGA ACTGACAAAT ATTTATAAGC AGGGGAACAG TTATATTTCT 
GATTTTACCA GTAATCCCGA AGGTGCATTA AGCAGCCAGG CTAAAAATCT GTTCAGCAAG 
TATGGAGCCT TTGATATGTG TAATACGGGC TATGAACGTA ATGATAATCT CTGTAAAGCA 
CGGATTGTGT CAACGGCTGC CAGTATTGAA CAGGGAAATG AGATCAATAA GCAGTTATCA 
AGTGCAATGT CTCAGATTCA GAGTTTAAGT AGCCGAATTG AGGCTTCAAA GGATATCAAA 
GAATCCCAGG ATTTGGCTAA CGCATTACAG GCGCAGTCGT TAAAAATGCA GGCGATAAAA 
ATGCAGTATG ATGTCTGGAA TAATAAAAAT AAAGCAGATC ATGAGATGTT GCTCACACAT 
GAACAAGAGG CCTTTATTAA ACAGCAGAAA GAAGCTGAAC CATTAACTTT TGATTAA
 
Protein sequence
MKRVKTFMLI SLLTASFYSS AGIPVAVDAS PEWAVEAARW TERLKQWSET AKHYQGQIQA 
YKDQLATATG IRNIAAFTNE LSNLQSELTN IYKQGNSYIS DFTSNPEGAL SSQAKNLFSK 
YGAFDMCNTG YERNDNLCKA RIVSTAASIE QGNEINKQLS SAMSQIQSLS SRIEASKDIK 
ESQDLANALQ AQSLKMQAIK MQYDVWNNKN KADHEMLLTH EQEAFIKQQK EAEPLTFD