Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_0031 |
Symbol | |
ID | 6268358 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010657 |
Strand | + |
Start bp | 16684 |
End bp | 17913 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 641724239 |
Product | nickase |
Protein accession | YP_001878799 |
Protein GI | 187730003 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 138 |
Plasmid unclonability p-value | 0.743382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTGTGT ATGTAGAACA GGAATACCGT ATTAAACGCG CTAAAGGGAC TGGGCGTGAT CCGAAATCTC CTAAGTTATC GGGAAGACAT ATACATGCCA GTAAATCGGC TTTTAATCAT AAAGTCAGAC ATGGTGCGGA CAAGAAAGCA TATACCTGGA CACCTACAAA AGAAGTCACT TTTAAAATCA CTGGCTCAGG TAAAACAGCC GCAGGTATCA AAAACGGTAT TGATTACATT ACCCGTAATG GTGAACTTGA GGCTTACTGT TATGATGGAA AAGGTTCAGA GCAAACAGGG AAAGGAGAAG ACTTTAACAG GGAGTTTACT TCAACTTTAT CTAAAGGAAA TGATTACTCC AGGACATATC GTGGAGAAAA CATCGATCAT GTGAAAAACA TGGTCTTTTC ACCACCACCA GAAGCTGGAG TAAGCAGGGA AGACGCTCTG AAAGCTACGG TAGAATTTCT TAAAGAGACT TATCCAAACC ATGCTTTCGT TGCCGTATAC CATGATGATA AAGAAGATCA TCCTCATGTA CATGTTAATA TTAAACTTCG TGATGAAGAA ACAGGAAGAA GATTAAGACT TACCAAATCT GAAACCAGGA AGTTCAGAAA CGGTTTTCAT AGAAAACTGA AAGGTATGGG ATATGATGTT ACTGCTACCT GGAAAAAAGA TCCCGAACGT AAACGGGAGA TTGAGCGATT ACAGGCTGAA AATCCGAAAA GACTCCGGAA TGTTTACAAG GTTGTGGATT TTGGGGAGAC TTCATATCAG AATAAGGCAG GGGAAAAACG AACACCTTTC CTCACTTATG AAACTTTAAA AGGTGGAAAA CAGGTTACGA TTTGGGGTAA AGACCTGAAA AATCATTTCG AGTCTGAAAA GCTCCAGCCA GGAACGCTTA TCAAAGTTAA AAAACTGGCT CCCACGCTTG TACATAGCCC GATGTTTAAT GATGATGGAA CTGTTGCAGG CTACAGGGAA ACGCATCGCA ATAACTGGCA GATTGAAAAT ATTGCCCTTG AGCGGAACAG AGAACGTCAG GTTCATGAGC GTGAAACCAG GCAACCGGAA GAGAGCGACG TTAAAAAACA GCTATCCAGA AAACATGAGC AAGGTCACAA TATCGGTTTT GCTCTTGAAT ACGGGTTTAC AAAGGATTCA GAAGAACATA AAAAACTAAG AATACAGCAA GAGAGGAACT GGAAAGGCCT GGGATTTTAA
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Protein sequence | MGVYVEQEYR IKRAKGTGRD PKSPKLSGRH IHASKSAFNH KVRHGADKKA YTWTPTKEVT FKITGSGKTA AGIKNGIDYI TRNGELEAYC YDGKGSEQTG KGEDFNREFT STLSKGNDYS RTYRGENIDH VKNMVFSPPP EAGVSREDAL KATVEFLKET YPNHAFVAVY HDDKEDHPHV HVNIKLRDEE TGRRLRLTKS ETRKFRNGFH RKLKGMGYDV TATWKKDPER KREIERLQAE NPKRLRNVYK VVDFGETSYQ NKAGEKRTPF LTYETLKGGK QVTIWGKDLK NHFESEKLQP GTLIKVKKLA PTLVHSPMFN DDGTVAGYRE THRNNWQIEN IALERNRERQ VHERETRQPE ESDVKKQLSR KHEQGHNIGF ALEYGFTKDS EEHKKLRIQQ ERNWKGLGF
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