Gene SbBS512_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_0018 
Symbol 
ID6268335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010657 
Strand
Start bp11906 
End bp12784 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content45% 
IMG OID641724226 
ProductDnaJ domain protein 
Protein accessionYP_001878786 
Protein GI187729988 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones151 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCAGG GCGGGGTAAA CTCGCTGGCG CTCGCGCTAA CTGCGGCATT CTGCGGCGCA 
AATCAGCATA ATCATGGCCT GCTGGTCAGT TGGGCTTTGC AGGGTGAAGG GATGGCCTGT
GCACCCTGGT ACGTTCGTCA GCGGCTGCGC CGCGCTTCGG GGCGATGTGG CTCCTGTGCT
GCCCTGGTAT TTTCGTTCGC CCCTTCCATC CGCTTACGCG GATTAAAAAA CGTGATAACA
ATCACTTATC GAGTAAAAAA ACGGGAGAAA ACTTGCAAAT ACGACTTAAA AGTCGTATTA
TTATTTCATC GAAAGGGGAA TGGCCCCTCT CACAATAGCC CAGCAGGGCA GGAGATTAAA
AAAATGAATA TCCAGGAAGC ATTAAACGTT TTTGGATTAT CCGGCGAATT AACTGAAAAA
GATATCAAAG CAGCATACAG AAAAGCCGCT TTAAAATATC ATCCAGATCG TAACCCGTTA
GGGGCTGAAC TGATGAAAGC GGTAAATGCA GCTTTTGATG TATTGATGGC AAATATTGAT
AAAATAAATC AGTTCCAGAG CACTGATGAA CATGCACGAT ATAATTACGG TGATGACCTG
GAAAAAGTAT TAAACGTTCT TTCTGGTTTA TCTGGTCTGG TATTTGAAGT GATAGGTAAC
TGGGTCTGGA TTAGTGGAGA AACCATTACA CATAAGGAAA CTTTAAAAGA AATCGGGTGT
AAATGGGCGG CAAAGAAAAA ACAATGGTTT TATCGTCCAG ACGAACATAA AAGTTACTGG
AATCGTGAAG AACACACGAT AGAAGAAATC CGCGCAAAAT ACGGTACAAC CGGACAGCGC
AGGGCGACAG GGTGGCAACG CGTGGAAACC AGAGCGTAA
 
Protein sequence
MHQGGVNSLA LALTAAFCGA NQHNHGLLVS WALQGEGMAC APWYVRQRLR RASGRCGSCA 
ALVFSFAPSI RLRGLKNVIT ITYRVKKREK TCKYDLKVVL LFHRKGNGPS HNSPAGQEIK
KMNIQEALNV FGLSGELTEK DIKAAYRKAA LKYHPDRNPL GAELMKAVNA AFDVLMANID
KINQFQSTDE HARYNYGDDL EKVLNVLSGL SGLVFEVIGN WVWISGETIT HKETLKEIGC
KWAAKKKQWF YRPDEHKSYW NREEHTIEEI RAKYGTTGQR RATGWQRVET RA