Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SbBS512_0018 |
Symbol | |
ID | 6268335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shigella boydii CDC 3083-94 |
Kingdom | Bacteria |
Replicon accession | NC_010657 |
Strand | + |
Start bp | 11906 |
End bp | 12784 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641724226 |
Product | DnaJ domain protein |
Protein accession | YP_001878786 |
Protein GI | 187729988 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 151 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCACCAGG GCGGGGTAAA CTCGCTGGCG CTCGCGCTAA CTGCGGCATT CTGCGGCGCA AATCAGCATA ATCATGGCCT GCTGGTCAGT TGGGCTTTGC AGGGTGAAGG GATGGCCTGT GCACCCTGGT ACGTTCGTCA GCGGCTGCGC CGCGCTTCGG GGCGATGTGG CTCCTGTGCT GCCCTGGTAT TTTCGTTCGC CCCTTCCATC CGCTTACGCG GATTAAAAAA CGTGATAACA ATCACTTATC GAGTAAAAAA ACGGGAGAAA ACTTGCAAAT ACGACTTAAA AGTCGTATTA TTATTTCATC GAAAGGGGAA TGGCCCCTCT CACAATAGCC CAGCAGGGCA GGAGATTAAA AAAATGAATA TCCAGGAAGC ATTAAACGTT TTTGGATTAT CCGGCGAATT AACTGAAAAA GATATCAAAG CAGCATACAG AAAAGCCGCT TTAAAATATC ATCCAGATCG TAACCCGTTA GGGGCTGAAC TGATGAAAGC GGTAAATGCA GCTTTTGATG TATTGATGGC AAATATTGAT AAAATAAATC AGTTCCAGAG CACTGATGAA CATGCACGAT ATAATTACGG TGATGACCTG GAAAAAGTAT TAAACGTTCT TTCTGGTTTA TCTGGTCTGG TATTTGAAGT GATAGGTAAC TGGGTCTGGA TTAGTGGAGA AACCATTACA CATAAGGAAA CTTTAAAAGA AATCGGGTGT AAATGGGCGG CAAAGAAAAA ACAATGGTTT TATCGTCCAG ACGAACATAA AAGTTACTGG AATCGTGAAG AACACACGAT AGAAGAAATC CGCGCAAAAT ACGGTACAAC CGGACAGCGC AGGGCGACAG GGTGGCAACG CGTGGAAACC AGAGCGTAA
|
Protein sequence | MHQGGVNSLA LALTAAFCGA NQHNHGLLVS WALQGEGMAC APWYVRQRLR RASGRCGSCA ALVFSFAPSI RLRGLKNVIT ITYRVKKREK TCKYDLKVVL LFHRKGNGPS HNSPAGQEIK KMNIQEALNV FGLSGELTEK DIKAAYRKAA LKYHPDRNPL GAELMKAVNA AFDVLMANID KINQFQSTDE HARYNYGDDL EKVLNVLSGL SGLVFEVIGN WVWISGETIT HKETLKEIGC KWAAKKKQWF YRPDEHKSYW NREEHTIEEI RAKYGTTGQR RATGWQRVET RA
|
| |