Gene SbBS512_B0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbBS512_B0002 
Symbol 
ID6268314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShigella boydii CDC 3083-94 
KingdomBacteria 
Replicon accessionNC_010656 
Strand+ 
Start bp703 
End bp1668 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content51% 
IMG OID641724208 
Productreplication protein 
Protein accessionYP_001878768 
Protein GI187729965 
COG category[L] Replication, recombination and repair 
COG ID[COG5655] Plasmid rolling circle replication initiator protein and truncated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGAAG ATAAATTCCT TTCGGACTAC AGCCCCCGTG ATGCAGTTTG GGATACCCAG 
CGCACGCTTA CCGATTCTGT AGGGGGTATC TACCAGATTG CTGCTGAATT CGAGCGCTAT 
GCACTCCGTA TGGCCTCCTG TAGCGGTTTG TTACGTTTTG GTTGGTCTAC CATCATGGAA 
ACCGGAGAAA CGCGCCTACG GCTTCGTAGT GCGCAATTTT GCCGTGTCCG TCATTGCCCT 
GTCTGCCAGT GGAGAAGAAC CCTCATGTGG CAAGCCCGTT TTTATCAGGC TCTACCGAAA 
ATTGTTGTGG ATTACCCGTC TTCCCGATGG TTGTTTCTGA CGTTAACTGT CAGGAACTGC 
GAGATAGGTG AACTTGGAAC AGTCCTTACA GCAATGAATG CGGCGTTTAA GCGAATGGAA 
AAGCGAAAGG AGCTATCACC TGTTCAGGGG TGGATCAGGG CTACGGAGGT GACGCGAGGT 
AAGGATGGCA GCGCACATCC GCATTTTCAC TGTCTGCTGA TGGTGCAACC TTCTTGGTTT 
AAAGGGAAGA ACTACGTTAA GCACGAACGT TGGGTAGAAC TCTGGCGCGA TTGCTTGCGG 
GTGAACTATG AGCCGAATAT CGATATTCGG GCAGTAAAAA CTAAGACAGG TGAGGTTGTG 
GCCAACGTTG CCGAGCAACT GCAAAGCGCG GTTGCTGAAA CGCTGAAATA CTCCGTTAAA 
CCGGAAGATA TGGCAAACGA TCCTGAGTGG TTTCTTGAGC TGACGCGGCA GCTTCACAAG 
CGCCGTTTTA TCTCGACCGG TGGGGCGCTA AAAAACGTCC TCCAGTTGGA TCGAGAAACC 
AATGAGGATC TTGTCATTGC CGACGATGTA GGGGATGGCA CTGATGACGG GAAGCGGACG 
GCGTTTGTCT GGGATTCAGG TAAACGGCGT TACAAACGCG CCCCTGAGAA GGATAAATCG 
GATTAA
 
Protein sequence
MSEDKFLSDY SPRDAVWDTQ RTLTDSVGGI YQIAAEFERY ALRMASCSGL LRFGWSTIME 
TGETRLRLRS AQFCRVRHCP VCQWRRTLMW QARFYQALPK IVVDYPSSRW LFLTLTVRNC 
EIGELGTVLT AMNAAFKRME KRKELSPVQG WIRATEVTRG KDGSAHPHFH CLLMVQPSWF 
KGKNYVKHER WVELWRDCLR VNYEPNIDIR AVKTKTGEVV ANVAEQLQSA VAETLKYSVK 
PEDMANDPEW FLELTRQLHK RRFISTGGAL KNVLQLDRET NEDLVIADDV GDGTDDGKRT 
AFVWDSGKRR YKRAPEKDKS D