| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2166 |
|---|
| Symbol | |
|---|
| ID | 6275462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2641229 |
|---|
| End bp | 2642551 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642614226 |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_001878754 |
|---|
| Protein GI | 187736642 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.81218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 58 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAAC AAAAGAGACT CTCCCTCGCC GGTATCGGGT GCGGTTCCCG TACGCGCACC
TACATGAAGC TGGCCATGGA ACAAAAAAAA CGCTACCGCA TTGCCGCCGC GGCGGATCCC
GTCAAACAGC GCACGGAAGC CGTTCGTGAC TTTGCCCCGG AGGAGGAACG GGATTCCGTC
CGCCTGTTCA AGGATGCCGC TTCCCTGCTG GCGGAACCGC GCCTGGCGGA CGTGGCCATC
ATCGGCACGC AGGACGACTA CCATTACGCT CCGTGCAGGA AGGCCATGGA GCTGGGCTAT
CATGTCCTGC TGGAAAAGCC CATCGCCAAG ACGCTGAAAG AAGCGCTGGA GCTGAGGGAT
ACGGCGCGCC TGCTGAAGCG CCGCGTGGCC GTGTGCCACG TGCTGCGCTA CACCCAGTTT
TACCGGACCC TGAAAAAAAT CATCGACAGC GGGGAAATCG GGGAAGTCAT CACCTTCAAT
GCCAATGAAG GCGTGGGGGC GTGGCACTTT GCCCACTCCT TCGTGCGCGG ACACTGGGGC
AACAGCAAAA CCTCCACTCC CATGATCGTT GCCAAATGCT GCCATGACAT GGATATCCTC
TACTGGCTCA TGGGCCGGCG TAAATGCCTT TCCGTCGCCA GCTTCGGGGA GCTTACCTTC
TTTACGAAAA AGACGCTCTC CTCACCCCGG CCGGAACGCT GCACGGAGTG GACCACCCCG
GTGGGGGAAG ACCCCTGGGA CGCCCGCAAA TACGCCACGG ACGACGAATG CAAACGCTGG
CTGGGCATGG TGTATGACCG GGCGCAGGAA GCTACCGCGG AGGAAATCTG CGAATGGCTG
AAAACCTCCC CGTGGGGCAG GGACTACCTC CAGTGCGACA ATGACCAGCC GGACCATCAG
GTTTCCATCA TGCGCTTTGA GGGAGGCTTG ACAGGCACGT TCACGATGAC GGCTTTCGAA
CAGGGGCGCC ACATTGAAGT GTATGGCACC AAAGGCAAAA TCCGAGCCGG AGTCTTCTAC
AAGGAAAACG GCCCCGGTGA AATAACCGTG ACGCCCCACT TTGGCGGGAA AACCCGCGTG
GTGGAGCTGG AGGAACTGGC CGGAGGCTAC CAAGGGCACG GCGGCGGCGA CTGGGGATTG
ATTGAGGCTC TGTATGATGA CATGCTGACG GTGCCCTCTC CGGAGGATAT GACCACTTCC
ATTGAGGAAT CCGCCCATTC CCATGTGATG GCCTTTGCCA CGGAACACGC CCGGCTGAGC
GGGCAGGTGG TGGATGTTGC TGACTTCGAA CGCAAGGTCG CGGAAGGCAT CCTGAATTAT
TGA
|
|---|
| Protein sequence | MPEQKRLSLA GIGCGSRTRT YMKLAMEQKK RYRIAAAADP VKQRTEAVRD FAPEEERDSV
RLFKDAASLL AEPRLADVAI IGTQDDYHYA PCRKAMELGY HVLLEKPIAK TLKEALELRD
TARLLKRRVA VCHVLRYTQF YRTLKKIIDS GEIGEVITFN ANEGVGAWHF AHSFVRGHWG
NSKTSTPMIV AKCCHDMDIL YWLMGRRKCL SVASFGELTF FTKKTLSSPR PERCTEWTTP
VGEDPWDARK YATDDECKRW LGMVYDRAQE ATAEEICEWL KTSPWGRDYL QCDNDQPDHQ
VSIMRFEGGL TGTFTMTAFE QGRHIEVYGT KGKIRAGVFY KENGPGEITV TPHFGGKTRV
VELEELAGGY QGHGGGDWGL IEALYDDMLT VPSPEDMTTS IEESAHSHVM AFATEHARLS
GQVVDVADFE RKVAEGILNY
|
|---|
| |