| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2164 |
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| Symbol | |
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| ID | 6275449 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2636285 |
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| End bp | 2639986 |
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| Gene Length | 3702 bp |
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| Protein Length | 1233 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642614224 |
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| Product | glycoside hydrolase family 18 |
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| Protein accession | YP_001878752 |
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| Protein GI | 187736640 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0772652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.613153 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTAAGG TGTTTTTCAA GAGGGCAGCC CATTTGCTGA CAGCGTTTTT TGCGGGAGGC
GTCTGTGTCC TGCAGGCGGC GGAGACGTCC GGCTTCGGCA TAGACCTGGG TAATGGTTCC
GGAACGGCGC AGGAGGGATG GACCAATGTA ACCATGCCAG CAACGGCATC GGGAGGCGCC
AATACATTTG TTGCCGTTCC GTTAATCAGG AATGGTGCGG CTTCTTCTTC TTCGTCCGTG
GCAGTGGGAA GCCTGTTCGG AAGGCTGGTT TCCCTGACCG TCTCCGCCAG ATGCAGTTCT
GGAGGTTCTT ATACGCTGGC GGAACCCAAT ACCCGGTATA CCTGGTATGA AGGGGGGAAG
CACAGGCACA ACGGTACGAA CGCTGACGCG CCTTCTTCTT TTGAATTCCC CAATGGCTGC
GAAGCTTTCA ATACCAGCAT GCGTCTGAGC GCCAACGGGA TGCCGTCCGC CTCCGCCGCG
GCCAGGCTTT CCTTCTCCGG ATTCCAGGCG GGCAAGGAAT ATACGGTATC TTTCTTTTGC
GGGCACAATG CGCCTGCTTA TGAATCCATG ACGCTGGTCA GCGGAACTCT GGTGGATGTG
CGGGGGCTTC AAAGTTCCAT GGGGAGCCTT TCCGGGAATC AATTTTCCGG TCTTTCCAAT
TCATCGGAAC AGGACGCTTA TCTGGCTGTG GAGTGGAGGG CCTGTGCGGA TGAACAGGGC
AGGCTGGTGT TTGATGTGAC CAAGGAGGCG GACAGCAGCG CTTCCGGCCG CATGGAACTG
AATGCCGTTA CCGTCAGTAC GGACGATTCC CCGGCTCCGG AAGTTCCGGA TCCCCGGCCT
GTCAGCGTCT TGCACAATAA GGCGCTCATT TTTCTTCCTT CTTCTCTTGC GTTCCCCGTT
CCTTCTTCCA CATGGGCGGC TGAAGGCCAG TTAACCTGTG AATTCTGGGT CAGGCCCAAT
GATGATGCCG TCACGGGAAA AATCATTTCT TTGGGAAATG CGTCTGTTTC CCTGGAACAC
GGTTGTCTGG CTCTGTCTGC TCCGGATGGG GATTCCGTCG CTTCCGTGAA AGCTGCCGGG
AAGGAATTGG CTGCGGGGGA ATGGCACCAT GTAGCCGTCT CCGTCGGGGA GGAGGTTATC
AGTCTGTATG TGGACGGAGG CCTGGCCGTT TCCTCGCCGC GGTCGCCTTA CCTGCAGGCC
ATGAAATCAG GCTGGAAAGG GATTGTGCTG GAGGCGGGGT TCAAGGGTGC TCTGGATGAA
CTGCGTTTCT GGAATGCGGC TCTGGGCGGG GAGGAAGACG ACTTTTTCTT GAACGGACCG
TTGCCCCTGT CCCATCCCAG GTATGGGAGG CTGGTGGGCT GCTGGCGTCT GGATGGGGAT
TTCCGTGATG CCAAGTGGAC GGAATTTGCG GAAAAGACAG GGAGCGCCTT TGTGCGCCCT
TACCAGGCGG TTGCCCCTGA AGGGACTGAA TTTTCCATTG TCACGGATAA TGAAACGTTC
CGTTACATGC TGGTGACGGC GTATGTGAGG AATGTGCATG TTATTTATGA CTGGCCGGCG
CGCGCCCATC TCATCAATAA TTCCGATTTG ATCTACATCA ATTCCGTTAC GCCGGCCGCG
GACGGTTCTC TCAATTTTCA ATATCCGGAC AATGACGTGA CGGAAAGCTC CGGTGTGGTT
CTGCTGCCGT CTGACGGGGA ATGTTCCAAT GTCCTGGACT TCTCCGGGGA AGGGGCTTAC
ATGAACGTGG GCGGAGGTTT GCTGGGCGGC GGCAGTTCCG GAGCGTTTAC CGTGGAAGTC
CGCATGGCTT TGGACGGAGA CGGACAGGAG GCGGTGCTGT TTGAAAATGA TAACGTTTCC
ATGAGGCTGG AATGGAAGGA AGACCATTAC AGGGTCCGTA CCCAGGCAGG CCCGGATAAA
GCCTGGGAGG CGGATTTGCC GCCTGTGGAA GCCGGCAGGT ATTTCTGGCT GGCCTTCGTC
AGGAATTCTT CTGCGGATAC GGCGTCCTTT TATGTGGACG GGGAGGCCGT AAGCACGGCC
GCCGCGGATG CGGGGGAAAT GGAGGGAACT GCCAATGCCG TCATAGGAAG GAATTTGGAT
GGCAGAATTG ATGAAATGCG CGTGTGGCAT GAGGCCCGTG CGGCGGCCCG CCTGGGGGCG
GCTGTCCAGC ACAGCTGGGG AGACAGGTTG TTGGTGGGCC GCTGGGGGAC AAGTGACCAA
TTTGGCCATG ATACAGCTTC CTGGGTGGAA CATGTCCGTA TCCTCCGCAG GCTGACTGAA
GGCGTTTCCG GAATGCGGAT ACGGCTGGGT GTCTCCGGCG GGAACTGGTC CGCCATGCTG
TCTGATGCAA ATGCCCGTGA GGCTTTTGCC GAAAATGTGG CGGAAGTGGT ACGCAAGCAT
CAATTGGACG GACTGGATCT GGACTTCGAA TGGATTGACC AGAACGATAC GGCCGCCTGG
AATAATTACG GAGAATTGGC CAGGGCTATC CGGGCGGCTT CCCCGGATAT GTTTTTTACC
ATTTCCCTGC ATACCTACTA TTACAAATTC CCGGCGGCCT GCATGCGTTA TGTGGATTAT
TTCACGTTCC AGAATTATGG CCCCCAGATT GATGTAAACG GATATAGCAG CATGGTTTCC
GCATGCGGAA CATACCGTTC ATGGGGCTAT CCGGACTCCA AGATCATGCT CAGCGCTCCG
TTCCAGGGGA CTCCGGGCGC GGGGCAGGGC GCCGATATCC GGGCTTACCG GGACATTGTC
TCAGCCTGCG CCGGAGTTCG GGAGGATCCT TCTCTGGATT CCGCCAGCTT CAATTATGGC
GGAGGCAAGG TTAAGACGCT GCACTTCAAT GGTGTGGATA CGGTCAGGAA AAAGGCCCGC
TACATCAGTG AACAGAAAGT GGCTGGGTTC ATGTACTGGG ATTTGGGAAT GGATGTGGCG
GATTCCTCTG GGAAGAACAA CTACTTTGAC GAATGCTGCC TGCTTCGGGC CGCCAACCGT
TATGTTTCCT CCACCGCTTA TCCGGATACT CCGGCCCCCT TTGCCCTTTC TTCTGCGGGG
GAAACCGTCC CGGCCGGGGG CGGTGCCGTG GCGGTGGAAG TGCAGTCGGA AGAGAAGGCT
CTGGGCTGGG TGGTCGCAGA TTGTCCGGAC TGGATTTCCG CCTCTACCGT TTCGGGAATC
GGCCGGACTA CAGTCATTTT GACGGCGGCG GAAAACAAAT CCGCTGACGG ACGGTTCGGG
ACGGTAATCT TCCGTTCTTC CGACAAACAG GAATGCTCTG TCATCATAAC GCAGGATGGC
GCCGAATTGA CGGGCTACGA CAAGTGGGTG CAGGACTCCT TCCCTCCGGA TGCTGCCGCG
GACCGGACGG CTGCGGATGC CGTTCCTGCC GGGGACGGTA TCCCCAACCT GATGAAATAC
GCCACAGGAC AGGATCCGTT GAAACCCTGC GGGAGCGTTA CGAAAGTAAC GCTGGAAGAG
GGGGAGGACG GATGCATGCA TCTGGTGCTG CGCTGGCCTG TAAATCCGCA GGCAACGGAT
GTGAAGCATG AAGTGGAAGC CTCCACGGAC CTGGTCGACT GGATTTCCCT GGGAGAAGTG
GAAACCGCCG GAAAGACGGC TGCCGAATTT TGGGATGCGG AACCCGTACG GGAAAGCGGG
ATGGAACGCC GGTTTTTGCG GTTGAAAGTG ACTCGGGAAT AA
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| Protein sequence | MVKVFFKRAA HLLTAFFAGG VCVLQAAETS GFGIDLGNGS GTAQEGWTNV TMPATASGGA
NTFVAVPLIR NGAASSSSSV AVGSLFGRLV SLTVSARCSS GGSYTLAEPN TRYTWYEGGK
HRHNGTNADA PSSFEFPNGC EAFNTSMRLS ANGMPSASAA ARLSFSGFQA GKEYTVSFFC
GHNAPAYESM TLVSGTLVDV RGLQSSMGSL SGNQFSGLSN SSEQDAYLAV EWRACADEQG
RLVFDVTKEA DSSASGRMEL NAVTVSTDDS PAPEVPDPRP VSVLHNKALI FLPSSLAFPV
PSSTWAAEGQ LTCEFWVRPN DDAVTGKIIS LGNASVSLEH GCLALSAPDG DSVASVKAAG
KELAAGEWHH VAVSVGEEVI SLYVDGGLAV SSPRSPYLQA MKSGWKGIVL EAGFKGALDE
LRFWNAALGG EEDDFFLNGP LPLSHPRYGR LVGCWRLDGD FRDAKWTEFA EKTGSAFVRP
YQAVAPEGTE FSIVTDNETF RYMLVTAYVR NVHVIYDWPA RAHLINNSDL IYINSVTPAA
DGSLNFQYPD NDVTESSGVV LLPSDGECSN VLDFSGEGAY MNVGGGLLGG GSSGAFTVEV
RMALDGDGQE AVLFENDNVS MRLEWKEDHY RVRTQAGPDK AWEADLPPVE AGRYFWLAFV
RNSSADTASF YVDGEAVSTA AADAGEMEGT ANAVIGRNLD GRIDEMRVWH EARAAARLGA
AVQHSWGDRL LVGRWGTSDQ FGHDTASWVE HVRILRRLTE GVSGMRIRLG VSGGNWSAML
SDANAREAFA ENVAEVVRKH QLDGLDLDFE WIDQNDTAAW NNYGELARAI RAASPDMFFT
ISLHTYYYKF PAACMRYVDY FTFQNYGPQI DVNGYSSMVS ACGTYRSWGY PDSKIMLSAP
FQGTPGAGQG ADIRAYRDIV SACAGVREDP SLDSASFNYG GGKVKTLHFN GVDTVRKKAR
YISEQKVAGF MYWDLGMDVA DSSGKNNYFD ECCLLRAANR YVSSTAYPDT PAPFALSSAG
ETVPAGGGAV AVEVQSEEKA LGWVVADCPD WISASTVSGI GRTTVILTAA ENKSADGRFG
TVIFRSSDKQ ECSVIITQDG AELTGYDKWV QDSFPPDAAA DRTAADAVPA GDGIPNLMKY
ATGQDPLKPC GSVTKVTLEE GEDGCMHLVL RWPVNPQATD VKHEVEASTD LVDWISLGEV
ETAGKTAAEF WDAEPVRESG MERRFLRLKV TRE
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