Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2141 |
Symbol | |
ID | 6275444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2607696 |
End bp | 2608184 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642614202 |
Product | hypothetical protein |
Protein accession | YP_001878730 |
Protein GI | 187736618 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.349254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 0.20117 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTGAGA ATCAGGACGA ACTCAAAGTG CAGATCAAGG CTTGGCTGAA ACAGCAGAAC ATTTCCCGCA ATGATTTTGC GGCGGAATGC TTCGTGTCTC CCAACACGGT CCGCAACTGG CTTGCCAAGG TGGCCATCCC CAAAGACAAG GAAGCTCTCA TCCGGCTCAT GATGGAAAAA ACGGAAAGGG AGAAAAAACT GAAAGAGGCG GCAAGAGCCA ATTGGAAGCC CTTTGTCGTC ATGCTGAGTT CCGAGGATTA CAAACTCATC GAAGAAGCCG CCAGAAGGGA CAACATGACG GTGGAGGAAT GGGCGGAAGC CACCCTGATC AAGGATGCCC AGAAGAGGAT GAAAAATTAT TACGACGACA GCAGCCTTCC GGAAGATGTA TCCCTGGCGG CGGAAGTACC GGAGGAATAC GGAGCTCCCA GACGTTCCGG CCCTTCATCA TCTCCGCCCT CTTCTGCCCG CCGCAAGCCG CGGCAATAA
|
Protein sequence | MSENQDELKV QIKAWLKQQN ISRNDFAAEC FVSPNTVRNW LAKVAIPKDK EALIRLMMEK TEREKKLKEA ARANWKPFVV MLSSEDYKLI EEAARRDNMT VEEWAEATLI KDAQKRMKNY YDDSSLPEDV SLAAEVPEEY GAPRRSGPSS SPPSSARRKP RQ
|
| |