Gene Amuc_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2141 
Symbol 
ID6275444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2607696 
End bp2608184 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content54% 
IMG OID642614202 
Producthypothetical protein 
Protein accessionYP_001878730 
Protein GI187736618 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.349254 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.20117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAGA ATCAGGACGA ACTCAAAGTG CAGATCAAGG CTTGGCTGAA ACAGCAGAAC 
ATTTCCCGCA ATGATTTTGC GGCGGAATGC TTCGTGTCTC CCAACACGGT CCGCAACTGG
CTTGCCAAGG TGGCCATCCC CAAAGACAAG GAAGCTCTCA TCCGGCTCAT GATGGAAAAA
ACGGAAAGGG AGAAAAAACT GAAAGAGGCG GCAAGAGCCA ATTGGAAGCC CTTTGTCGTC
ATGCTGAGTT CCGAGGATTA CAAACTCATC GAAGAAGCCG CCAGAAGGGA CAACATGACG
GTGGAGGAAT GGGCGGAAGC CACCCTGATC AAGGATGCCC AGAAGAGGAT GAAAAATTAT
TACGACGACA GCAGCCTTCC GGAAGATGTA TCCCTGGCGG CGGAAGTACC GGAGGAATAC
GGAGCTCCCA GACGTTCCGG CCCTTCATCA TCTCCGCCCT CTTCTGCCCG CCGCAAGCCG
CGGCAATAA
 
Protein sequence
MSENQDELKV QIKAWLKQQN ISRNDFAAEC FVSPNTVRNW LAKVAIPKDK EALIRLMMEK 
TEREKKLKEA ARANWKPFVV MLSSEDYKLI EEAARRDNMT VEEWAEATLI KDAQKRMKNY
YDDSSLPEDV SLAAEVPEEY GAPRRSGPSS SPPSSARRKP RQ