Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2137 |
Symbol | |
ID | 6275464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2605088 |
End bp | 2605735 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642614199 |
Product | nitroreductase |
Protein accession | YP_001878727 |
Protein GI | 187736615 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.242052 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGATCT CCCCGGAACA GTATATTGAC GGTCTGGAAT GGCGTTACGC CTGCAAAAAA TTTGATCCTG AAGCCCGTCT TGAACAGCCC ACCTGGCATG CGCTGGCGGA AAGCCTGCGT CTCAGTCCCT CCTCCCTGGG GCTTCAGCTC TGGAAGTTTG TCGTCGTGAC CAACAGGGAA CTGAAGGCTC GCCTGCGGGA GGTTTCCTGG AACCAGTCCC AGGTGGAGGA CTGTTCCCAT TACGTGGTGC TGTGCTCCCG GCGCGACGCC ACCAGGCGGG ATGTGGACCG TTACCTGGCC CAGATTGAAT TCACGCGCCG CCCCTCCGCT GAAAAACTGG CTTCCTCCGC CGATTTTTAT ACCAGCTACG TGGAGGCTCT GGCTCCGGAA AAGATGCATG CCTGGCTGGA TTGCCAGGTG TACATTGCCG TGGGGTTCCT GCTCAGCGCC GCCGCCGCCC TGCGGGTGGA TTCCTGCACG ATCGGCGGCA TGGACCGCGC CAAGTATGAT GAAATCCTGG GCCTGGACGG TACGCCGTAC CGCTCTGTGG TGGGGGTGGC TCTGGGCTAC CGCGCCAAGG ATGACGCTTA TGCCCGCGAG GCCAAGGTGC GCTTTCCCGC CGGAGAGGTG ATTGATATCC GCGCCTGA
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Protein sequence | MMISPEQYID GLEWRYACKK FDPEARLEQP TWHALAESLR LSPSSLGLQL WKFVVVTNRE LKARLREVSW NQSQVEDCSH YVVLCSRRDA TRRDVDRYLA QIEFTRRPSA EKLASSADFY TSYVEALAPE KMHAWLDCQV YIAVGFLLSA AAALRVDSCT IGGMDRAKYD EILGLDGTPY RSVVGVALGY RAKDDAYARE AKVRFPAGEV IDIRA
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