| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2129 |
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| Symbol | |
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| ID | 6274771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2595940 |
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| End bp | 2597697 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642614191 |
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| Product | nickel-dependent hydrogenase large subunit |
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| Protein accession | YP_001878719 |
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| Protein GI | 187736607 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.85862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 57 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT ACACATCAGC GGACGTTCCG GAATCCAGCC GGGTGGTCAT TGACCCGGTA
ACGCGCATCG AAGGCCACCT GCGGGTGGAA ATGGAGGCCG GGGACGGCGT CATCAAAAAT
GCCTGGACGT CCACCACGCA GTACCGTGGC ATTGAGGTGA TCGCCTGCAA GCGGGACCCC
CGGGACGTTT GGGCTTTTGT GGAACGCATC TGCGGCGTCT GCACGGGTAC GCACGCCATC
GCGGCCCTGG CTGCGGTGGA AGACGCGCTC CAATACCCGG TGCCCGTCCA GGCCCGCCTC
ATGCGAGACC TGGTCAGCGG AGCCCTGGGC ATCCAGGACC ACGTCATCCA TTTTTACCAG
CTCCAGGCCA TGGACTGGGT GGACGTGATG TCCGCCCTGA AGGCGGACCC CGCGGAAACC
GCCGCCATCG CCAAGTCCCT TTCCGACTGG CCCCTGTCCT CCGCCGCGTA TTTCGCCGGA
GTGCAGAAGA AGCTGAAGGA CTCCATCGCC TACGGGCAAT ATTCCATCTT TACGAACGGC
TACTGGGGCC ATCCGGCCTA CAAGCTGCCG CCGGAGGTGA ATCTGCTGGG CGTGGCGCAT
TATCTCCAGG CCCTGGTCTG GCAACGGGAC ATGATCAAAA TCCACACCAT CCTGGGCGGC
AAGAACCCGC ACCCGAACTT CCTGGTCGGC GGCATGGCCT GCGCCATCAA CATGAACAAT
GACCAGGCCA TCAACCAGTT TTCCCTGAGC TACCTGAAGC AGCTGGTGCA AACCTGCCAC
GATTTCATTC ACAAAGTATA TTATCCGGAC ATTGTAGCCA TCGCCGGATT TTATAAGGAC
TACGCCCACA TTGGCGCGTC CAACCCCAAC TTTTTCTGCA CTGGGGCTCC GTCTGAAATC
AACACGGGCG CCCCCGCCGG CAAAGGCATG ATCAAGCCCG GCGTGCTTCT GAATGGGGAT
TACAGGAACG TGCTTCCCTT TGACCAGGAC AAGATCAGGG AATTCGTCAC CAGCTCCTGG
TACAGGTATA CGGAAGGCAG GGACGCGGGC CTGGCTCCGT ATGACGGGGA GACGAATGCG
GACTACAACG GCCCCAGGCC GCCCTACAAG TGGCTTTCCG ACCACCCGCA GTACACCTGG
GTGAAAGCCC CGCGCTATGA CGGCCACGCG ATGGCCGTGG GTCCGAACGC CCGCATGATG
ATTGGCTACG CCCAGGGGGT TCCCGCCATC GTGGAACGGG TGGATGCCGC CTGCGACAAG
CTGGGCCTGC CGCGCGACAA CGCCTTCATG AACTCCACGC TGGGCCGCGT ATACGGCCGT
GCGCTGGACG CCCTGATCAA CGTGGACATG ATGGTGGACC AGCTCCAGGA AATGACGGAC
CGCATCAGGA ACGGGGAAAC CTCCACCTTC AACCCGGAAA AATGGGAACC GGAAACCTGG
CCCTCCTCCT GCAAGGGCGT GGGCTGGGTG GAAGCGCCCC GCGGCAGCCT GAGCCACTGG
GTGCGGATTG AAAACGGCCA GACGGTGAAT TACCAGGCCG TAGTCCCCAG TACATGGAAC
AGTTCCGGAC GGGACGCGGC GGGGCAGATG GGGCCATATG AATATTCCCT GGCCCATACC
GGGAAACACC CGCTGGTGGA CCCCTCCCGC CCGGTGGAGC CCCTGCGCAC CATTCACAGC
TATGACCCGT GCCAATCCTG CGCCGTCCAT TTGTTTGACG AAGAAGGGGA GGCCATTCTG
ACCAGACAGG ACCCGTGA
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| Protein sequence | MSNYTSADVP ESSRVVIDPV TRIEGHLRVE MEAGDGVIKN AWTSTTQYRG IEVIACKRDP
RDVWAFVERI CGVCTGTHAI AALAAVEDAL QYPVPVQARL MRDLVSGALG IQDHVIHFYQ
LQAMDWVDVM SALKADPAET AAIAKSLSDW PLSSAAYFAG VQKKLKDSIA YGQYSIFTNG
YWGHPAYKLP PEVNLLGVAH YLQALVWQRD MIKIHTILGG KNPHPNFLVG GMACAINMNN
DQAINQFSLS YLKQLVQTCH DFIHKVYYPD IVAIAGFYKD YAHIGASNPN FFCTGAPSEI
NTGAPAGKGM IKPGVLLNGD YRNVLPFDQD KIREFVTSSW YRYTEGRDAG LAPYDGETNA
DYNGPRPPYK WLSDHPQYTW VKAPRYDGHA MAVGPNARMM IGYAQGVPAI VERVDAACDK
LGLPRDNAFM NSTLGRVYGR ALDALINVDM MVDQLQEMTD RIRNGETSTF NPEKWEPETW
PSSCKGVGWV EAPRGSLSHW VRIENGQTVN YQAVVPSTWN SSGRDAAGQM GPYEYSLAHT
GKHPLVDPSR PVEPLRTIHS YDPCQSCAVH LFDEEGEAIL TRQDP
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