| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2127 |
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| Symbol | |
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| ID | 6273698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2593123 |
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| End bp | 2594607 |
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| Gene Length | 1485 bp |
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| Protein Length | 494 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614189 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001878717 |
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| Protein GI | 187736605 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.96067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.997375 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACATG CCATTCTTCC CTCCATGTGC GCTGTTGCCG TCGCAGCCTC CTGCAGTCCC
ACCCTTGCCC AACAGGCGGC TCCCGCTGCG GCGGCTTCCC CTGCTTACCT GAACACGGAA
CGCGGTCTGC GCGTGAAAAC TCTGGAAGGC AGGGAAATAA GCCCCAGCCT GATGAAAGGA
ATGCGCCCGG AAGAACAAAT CACCAAAAGG ACGCCCGGCG TTCCCACCAG GCCCAGCGTA
CTGCTTCAGC ATGAAGGCGG AACTTCCGCT CCCGGCCTGG AATGGTTTGC GGCCAGGCCC
CTTAAAATGA TGCCGTACCT GGACAGTTCC TACGTTTTCG GCAATACCTG TGCGGAACCG
AACGCCTGGA TACGCGAAGA CATGATTTCC ACCGGAGCGC AAAAGCTCAA GACCGCTCTC
TCCAGATACG GCATTACTTA TTCCGCCCAG TTCGGATTCA ACTACACGGG GCTGACGGGC
GGCGGCCTGA ACGGAAAAAC GGATTTCCCC TCCTACAATG GTTCCCTGCT GACCAATATC
ACCATCTTCC GCAATCATTC CACGGGCAGC GGCCTGTACC TGGCCTCCGA GTTCGACTTC
GGCAACGGCT TTGACTTCAA TGAAGGCAGT AAAGGCCCCA AAACCACGCT GGGCTCCCTC
CAGAACCCCA CCAGCTCCTT CCAGGGCCCG GCCCCCCACC TGAGCAACCT GAGCCTGGCA
TGGGTGGGAG CGGGAGGAAA GCTTCTGCTG ATGGCGGGCC AGCTGGACAC CACCAACTAC
ATGGACCACA ACGCTTACGC CAATTCCCAT AACAATAACC TCACCAACAG CGTTTTCGGC
AATAATCCCG TACTCCCCCT GACTGATAAT TCCCTGGGAT TCCATTTCGC GTGGCAGCCA
ACCACCTCCT TTTACGTGAT GGGAGCCACT GCCGCCAATA ACATGGCTCA AAACCACAAT
CCTTTCCGGA ACCTGAATTC CGACAATTGG ACGAACGTGC TTGAATTCGG CTACGTGGCG
GAAGATTTTT GCAGCATGGG CCCCGGCGTG TACCGCCTCC AGCCCTTTTT CACCACCAGC
AACGGTGAAA ACGGGGGCGG CGTGGCCGTA AACTTCCAGC AGCAGCTGGG CCGCAGCAGC
CACTTGGGGT GGTTCTTCCG CGGCGGCTGG GCAAGCGATG ACGCAGCCAC GCTGACCGGC
GTACGCTGCG CGGCCACCAC AGGGCTGGTG CTTCTTTCCC CCTTCCGGGG AAAGGGCGCA
TCCAATGACG GATACCTGGG CCTCGGTTTC CTCTGGCAGC AGGGGGCTAA AAAGAACGGC
CCGTACGTGA ACAGGAATGA ATACGGCATT GAATTGACGT ATGTGGCCCA GGTGACGCCC
ACCATGACTC TCCAGCCTGA TATTCAGCTT GTCAAGAATC CCGTCAACGG CCGCAGAGGG
CAAACGGCGG TGGTTTTCCA GATCCAGAAC GTCTGGTCCT GGTAA
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| Protein sequence | MRHAILPSMC AVAVAASCSP TLAQQAAPAA AASPAYLNTE RGLRVKTLEG REISPSLMKG
MRPEEQITKR TPGVPTRPSV LLQHEGGTSA PGLEWFAARP LKMMPYLDSS YVFGNTCAEP
NAWIREDMIS TGAQKLKTAL SRYGITYSAQ FGFNYTGLTG GGLNGKTDFP SYNGSLLTNI
TIFRNHSTGS GLYLASEFDF GNGFDFNEGS KGPKTTLGSL QNPTSSFQGP APHLSNLSLA
WVGAGGKLLL MAGQLDTTNY MDHNAYANSH NNNLTNSVFG NNPVLPLTDN SLGFHFAWQP
TTSFYVMGAT AANNMAQNHN PFRNLNSDNW TNVLEFGYVA EDFCSMGPGV YRLQPFFTTS
NGENGGGVAV NFQQQLGRSS HLGWFFRGGW ASDDAATLTG VRCAATTGLV LLSPFRGKGA
SNDGYLGLGF LWQQGAKKNG PYVNRNEYGI ELTYVAQVTP TMTLQPDIQL VKNPVNGRRG
QTAVVFQIQN VWSW
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