| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2126 |
|---|
| Symbol | |
|---|
| ID | 6273704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2591830 |
|---|
| End bp | 2592507 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 642614188 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878716 |
|---|
| Protein GI | 187736604 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.551528 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 0.849776 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCAGG GGGCAACCGT CCTTACTTTG GATTCCAGTG AATTGCAGGC AGCAGGCGGA
TCATATACCC TGACGGAGGG TATAAACTCC GGTTACGGCA ATTTCTCCGT GACCATGGCC
CTGGACGCTC AGGCTTTCCA AAACGCCATT CTGGCAGGTA ACGTCAAGGC GAATATTTTT
TCCGCCAATA ATAATATGAT CGGCCTGGGC CTCAACTACG TTTCTTCAGG AACTCCCACG
GCGGGCATTT ATGGTTCCTG GCAAGGAGAG AACTACAACC GCACGATTAC TTCTGTCAAC
GGTTCTGAAC TCAATTTGAA TACGGGATTG AAGGAATTGT TCACCGAAAA CAGCTATGAA
TCCGCCGCCA TCACTTATCA GATTACCAGC ACCGGAACCT GGACTTACCT GACCCTGGTT
GATTCCGAAG GAACCGCCAC CACTTATGGT GGTCAGGATT CAGGGTTGAA AGCGAGCGGG
TTCGGAGCCC TGACTTCATT TACCTATGGC ACGGATTACG TCAAATACCT TGTCGTGGAT
AATACCACGT TGCAGGCTAA TGCTTCCCAG GAAGCCAATC TTAATGCCAT TGCGGCGGCT
GCCGTTCCCG AACCGGCCAC GGCATCCCTC AGCCTGATTG GTCTGGCTGC CCTCATGATG
CGTCGCAGAC GTGCCTGA
|
|---|
| Protein sequence | MVQGATVLTL DSSELQAAGG SYTLTEGINS GYGNFSVTMA LDAQAFQNAI LAGNVKANIF
SANNNMIGLG LNYVSSGTPT AGIYGSWQGE NYNRTITSVN GSELNLNTGL KELFTENSYE
SAAITYQITS TGTWTYLTLV DSEGTATTYG GQDSGLKASG FGALTSFTYG TDYVKYLVVD
NTTLQANASQ EANLNAIAAA AVPEPATASL SLIGLAALMM RRRRA
|
|---|
| |