Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2108 |
Symbol | |
ID | 6274499 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2568207 |
End bp | 2569166 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642614170 |
Product | glycoside hydrolase family 16 |
Protein accession | YP_001878698 |
Protein GI | 187736586 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2273] Beta-glucanase/Beta-glucan synthetase |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.369089 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCATCA GGACAACGCT CCTTTTTCCT ATTCTTTTTC TCTCACTTTC AGGATCCTCC GTCATGGCGG CAACCCCTTG GGTTTCTGAC AGGAACTGGG AACTCGTTTT TGAAGACAAT TTTGACGGCT CATCGCTGAA CGCACACAAC TGGAGCCGCA TTGATTACGT AGGCTATAAT GCCCCGGACT GGCGCAAGTA CCAATCCCGG GACGAAAGCC TTGTGGAATT CCGGGAAAAG GACGGCAACT CCGCCATGAC CCTGTGGGGA AAATACGGGG ACTACACCAC CCAAACCAAC CAGACTGCCC CAGCCAGGAC ATACGCCTGC GGAGGGGTAT ATTCCCTGAA AACCTTCTCC TTCCAATATG GATACGTAGA AGTCCGCGCC AGATTCGACT GTGTGCAGGG CGTCTGGCCG GCCATCTGGA TGATGCCCAA ATCCGACAGC ATCGGCTGGC CTGTCGGAGG GGAAATTGAC ATCATGGAAC ACCTGAATTA CGAAGGCCGT GTTTACCAGA CAATCCACTG GTCGCAAAAC GGCGTTCCCA ACCAGGATAA CTCCCAGGGG GTCACCCCCG GTTGGAACGA TGGTGCCGAA AAAGCAAACT GGCATACCTA CGGGATGGAA TGGACGGAAG AAGGCATCAC CTTTTATGTG GATGGAAAAG CAACCGGTTC ATTCAAAAAG CCCAATAACG CAAACTGGCC CTTTGACAAG GACGGAAACG AATTCTACCT GATCATCGAC CAGCAGATTG GAGGCAGCTG GGTGGAAAAC GCAGGAGTTA ATAAGGGAAT CGACCAAAAT ACGCTGGCCA ATTCCGGAGC CGCATTCGAC ATCGATTATG TCAAAGTCTA TTCCTCAAGC ATCTACAACC ACCTCGTTCC GGAACCCGCT GTGGCTTCGC TGGGCCTGTT GGGAATGGCC TTGCTGGCGG CTCGCCGCAA AAGAAACTGA
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Protein sequence | MFIRTTLLFP ILFLSLSGSS VMAATPWVSD RNWELVFEDN FDGSSLNAHN WSRIDYVGYN APDWRKYQSR DESLVEFREK DGNSAMTLWG KYGDYTTQTN QTAPARTYAC GGVYSLKTFS FQYGYVEVRA RFDCVQGVWP AIWMMPKSDS IGWPVGGEID IMEHLNYEGR VYQTIHWSQN GVPNQDNSQG VTPGWNDGAE KANWHTYGME WTEEGITFYV DGKATGSFKK PNNANWPFDK DGNEFYLIID QQIGGSWVEN AGVNKGIDQN TLANSGAAFD IDYVKVYSSS IYNHLVPEPA VASLGLLGMA LLAARRKRN
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