| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2104 |
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| Symbol | |
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| ID | 6273696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2558514 |
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| End bp | 2560115 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642614166 |
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| Product | 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase |
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| Protein accession | YP_001878694 |
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| Protein GI | 187736582 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1165] 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase |
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| TIGRFAM ID | [TIGR00173] 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATTCCC CCGCATCCTT CGTCAAATCC CTGCTGGCCC AATGCTGCCT GGGCGGCATT
TGCGAGTGGG TGGTCTGCCC CGGCGCGCGC AACATGGCGC TGCTCCAGGT GCTGGCTGCC
GCGGAGGATC TGGTGAAATG GACTCACTTT GACGAACGGT CCGCCGCCTT CTTTGCGCTG
GGCCGCATTC AGGATATAGG GCTGCCCGTG GCCGTGGTCA CTACCTCCGG AACGGCGGCG
GCGGAACTGC TCCCCGCCGT GGTGGAGGCC TACTACCAGC GCCGCCCCCT GCTCCTGCTC
ACGGCGGACC GTCCGGCGGC CTGCCGGGGT TCCGCCGCTC CCCAGGCCAT CGAACAGGCG
GATCTGTTCG GCATTTACGC ACCCACGATT GACCTGGAAA CGCCGGAAAG CCTGCCGGAA
GACATTCTGC AAGACTGGGA TTACGCCTCA CCCCTCCATA TCAACGTGTG CCTGCCGGAT
CCGGACCCTG CCTGGAACCC CGGCAGCTGC GACCTTTACC CGGCGGAACC TCCGGAGGAA
AACGGATTCC GGGGCTCCCT GGCAGAACTG GCCCGGGCCC TGCGCTTCAA ATCGCGCGGC
GGGCTGGTGG TCATGATCGG CGGCCTGGAC CCCACGGAAC AAGCCCCGGC CCGGTGGCTG
GCCAACGAAC TGAAAGCCCC CGTGGTGGCG GACGCCACCT CCGGACTCCG GGAAGAGCTG
GCCCATCTGG CTCTGACGGA CGCAGACGCC CTGCTGAGGG AACACCCGCC CGCCGTCCTG
CTCAGATTAG GGGACGTGCC CGTGGCCCGC TTCTGGCGCG ACCTGGAGGA CATTCCAGCC
ACGGAAGTCT TCTCCGTCAC CCGCACCGGC TTCTCCGGGC TGGCCCGCCC CTCCTCCGTC
GTAACCGGAG ACCTGGAAGC CATTCTGCAT GCGCTGGGGG ATATAGATAC CGTGGGCGAC
GTCAACGGCC TGCGCGCCAT GAACAAACGC AGGAAAGCCC TGATGGAGGA ACTGCTCATC
ACCTGCCCGG AAAGCGAACA GGCCATGGTG CGCTCCTTCT CCTGCTTTGC CGCGGACGGA
GACTGCATTT ACCTGGGCAA CTCCATGCCC GTGCGGTACT GGAACAGCTT CGCCCAGACG
TCCATCCCCA CGGAAAACGT CCGCGCCAAC CGGGGCACCA ACGGCATTGA CGGGCAAATC
TCCGGTTTTC TGGGGGTCTC CGCCCGGTGT TCCCGCTCCT GGGCTCTCGT GGGCGACCTG
ACCGCCATGT ATGATTCCAA TGCCCTGGCA CTCCTTCCCC AACTGGACAG GGGGACCCGC
GTCCTCGGCG TCATCAACAA CGGCGGAGGG GGCATCTTCC GCACCCTCCC GGGAGCAGAC
GGCCAGCCGG AAACCATGAG GAAGCTGCTT GTACAACCCC ACGCCCATTC CTTCAAAGCC
ATTGCGGAAC AATGGGGAAT GCGCTACCTG ACCATCCGCA CGGCGGAGGA CTTCGACCAG
CTTGATTCCC TGGAGGAAAA CAGCCAGACG CTTGTAGAGC TCATCCCGGA CAGGGAGCAG
ACGGAACAGA TCCGCCTCCG GCTGGCCAAC GCCCAGGTGT AA
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| Protein sequence | MNSPASFVKS LLAQCCLGGI CEWVVCPGAR NMALLQVLAA AEDLVKWTHF DERSAAFFAL
GRIQDIGLPV AVVTTSGTAA AELLPAVVEA YYQRRPLLLL TADRPAACRG SAAPQAIEQA
DLFGIYAPTI DLETPESLPE DILQDWDYAS PLHINVCLPD PDPAWNPGSC DLYPAEPPEE
NGFRGSLAEL ARALRFKSRG GLVVMIGGLD PTEQAPARWL ANELKAPVVA DATSGLREEL
AHLALTDADA LLREHPPAVL LRLGDVPVAR FWRDLEDIPA TEVFSVTRTG FSGLARPSSV
VTGDLEAILH ALGDIDTVGD VNGLRAMNKR RKALMEELLI TCPESEQAMV RSFSCFAADG
DCIYLGNSMP VRYWNSFAQT SIPTENVRAN RGTNGIDGQI SGFLGVSARC SRSWALVGDL
TAMYDSNALA LLPQLDRGTR VLGVINNGGG GIFRTLPGAD GQPETMRKLL VQPHAHSFKA
IAEQWGMRYL TIRTAEDFDQ LDSLEENSQT LVELIPDREQ TEQIRLRLAN AQV
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