| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2090 |
|---|
| Symbol | |
|---|
| ID | 6275638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2541168 |
|---|
| End bp | 2542343 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 642614152 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_001878680 |
|---|
| Protein GI | 187736568 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATCC TCTTTTTGCT CGGAAAATTC CCTTCCATAG GCGGCGTGGA AACCGTCACC
GCCATTTTGG CGAATGAATT CTCCGCCCGG GGCCATGCGG TTCATGTGGT TTCCTTTGAA
CAGGTAACGG AAAAGCCCTC CCCAGCGCTG GACGAACGGG TCACGCTGCA CCGGCTGAGC
TACCCCGTTT CCAGCCGGTC CAACCGGAAT GCCCTGCGGG ACATCCTGGC CACCTGCCGC
ATTGACGTCA TCATCAACCA GTGGTGCCTG CCCTTCCACG TCACCAGGCT GTGCCGGAAA
GCCATGAGGG GCCTGCCCTG CCGCCTGCTG GCCGTCCACC ATAACGCCCC GGACTGCAAC
GCACGGCTGG AAGGCCTCAG GATGCGCATG GCCCGGACGG GAAACCCGGT GAACAGGGCG
TCCCTGCGCC TTCTGCTGAA AGGCTGCGCC ATGGCTACCG GGGCCAGCCT GCGTTACGTT
TACGCCCACA GCGACCGTTA CATCCTCCTT TCAGACAGTT TCCACCAGGC CTTCCGGAAC
ATCACCGGAC TGAAAGACAC CGGAAAACTT CTGACGATTC CCAACCCCAT TACCGTGGAA
AACCCGGAAT TCCGCTATGA ACCGGGCCTC AAGAAAAAGG AGGTTCTTTT TGTCGGACGG
CTGGAACCCA ACCAGAAACG GGTCTCCCGC GTGCTGGAAA CGTGGGCGCT GCTGGAACCC
TGCTTCCCGG ACTGGACTCT CCGCCTGGTG GGTGACGGGC CGGAAAAACG CTCCCTTCAG
GAATTCTGCG AGGAACACCG CCTGAAGCAC GTCTCCTTTG AAGGCTTCCA AAATCCTGCC
CCGTATTACG AACAGGCCTC CCTGCTCTTT TTAACCTCGG AATATGAAGG ACTTCCTCTC
GCTATGGTGG AAGCTATGTC CTTCGGCGTC TCCCCCATTG TTTACGGAAG CTTCTCCGCC
GCCTATGACC TGGTGGACCA CGGAAAAGAC GGCTGCATCC TGCCCGCGGC CGGCGGTTTC
CAGGCGCATC GGATGGCGGA AATGGCCGCA GGGCTGATGC GGGAACCGGC CGCCCTGCGC
GCCATGGCGA GGAACGCCAT AGCCAAAAGC CGGAAATTCA CGCGGGAACA TATCATTCCC
CAGTGGGAAA AAGCTTTCCT CCCAGACGCC TCCTGA
|
|---|
| Protein sequence | MNILFLLGKF PSIGGVETVT AILANEFSAR GHAVHVVSFE QVTEKPSPAL DERVTLHRLS
YPVSSRSNRN ALRDILATCR IDVIINQWCL PFHVTRLCRK AMRGLPCRLL AVHHNAPDCN
ARLEGLRMRM ARTGNPVNRA SLRLLLKGCA MATGASLRYV YAHSDRYILL SDSFHQAFRN
ITGLKDTGKL LTIPNPITVE NPEFRYEPGL KKKEVLFVGR LEPNQKRVSR VLETWALLEP
CFPDWTLRLV GDGPEKRSLQ EFCEEHRLKH VSFEGFQNPA PYYEQASLLF LTSEYEGLPL
AMVEAMSFGV SPIVYGSFSA AYDLVDHGKD GCILPAAGGF QAHRMAEMAA GLMREPAALR
AMARNAIAKS RKFTREHIIP QWEKAFLPDA S
|
|---|
| |