Gene Amuc_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2081 
Symbol 
ID6273948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2531678 
End bp2532454 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content53% 
IMG OID642614143 
Productglycosyl transferase family 2 
Protein accessionYP_001878671 
Protein GI187736559 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.15987 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT CAGTCATTAC GGTTTGTTAT AACAGCATTG CAACGCTGCA AGACACGCTG 
GAAAGCATTC TGCGGCAAAC CTACCCGGAC GTGGAAAGCA TTGTGGTGGA CGGGGCCAGC
AAGGATGGAA CCGTGGAATT GATTGAAAAA TACAGTCATC AATTTTCCGG CCGCATGAAA
TGGCTATCCG AGCCGGACAA GGGAATTTAT GATGCCATGA ACAAGGGGAT AGGCATGGCC
ACGGGAGATG TCATCGGCTT TCTGAATGCG GATGACTATT ACCAGGACGG AAACGTGCTG
GAAGCCATCG CCGAAGCGTT TGCCCGGCAT GGGACGGACG CTGTGCACGG CAATCTGCAC
TACATCAACG GAGCAAGGGA AATCGTACGC ACATGGCGCG GAACGGAGTA CACTCCCGGT
TCCTTCCAGC GCGGCTGGAA CCCGGCGCAC CCCACGTTCT ATTGTAAAAA GGACTGCTTT
ACCCGTTACG GCGGCTTTGA TCCTGCTATA GGCAGCGCGG CGGACTTTGA GCTGATGATG
CGCTTTATAG AAAAAAACAG CATTTCCACC GCCTATATCG ACCGCGACAT GGTATTCATG
CGCACCGGAG GCTCCAGTAC GGCGGGCTTG AGAGCCATTC TGAGGAATAC GCGCCAGAAC
AAGCAGGCAT TCAAAAAAAA CGGCATCCCT TACCCGTGGC ATTACGGAGT AACCCGGCTG
CTGGCCAAGG CTGGCAGTAT GCGCAATCCC ATCCTTTATC TGTTCAAAAC CCGTTAA
 
Protein sequence
MKISVITVCY NSIATLQDTL ESILRQTYPD VESIVVDGAS KDGTVELIEK YSHQFSGRMK 
WLSEPDKGIY DAMNKGIGMA TGDVIGFLNA DDYYQDGNVL EAIAEAFARH GTDAVHGNLH
YINGAREIVR TWRGTEYTPG SFQRGWNPAH PTFYCKKDCF TRYGGFDPAI GSAADFELMM
RFIEKNSIST AYIDRDMVFM RTGGSSTAGL RAILRNTRQN KQAFKKNGIP YPWHYGVTRL
LAKAGSMRNP ILYLFKTR