| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2079 |
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| Symbol | |
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| ID | 6273991 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2530094 |
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| End bp | 2530765 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642614141 |
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| Product | PHP domain protein |
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| Protein accession | YP_001878669 |
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| Protein GI | 187736557 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4464] Capsular polysaccharide biosynthesis protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 0.376107 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTCGGCA ACCTGTTCAC CCCCCGGTAT GCGACATCCA GCCTTTTTCC GGACGGCATG
GACATGCACA CCCATATTCT ATGGGGGGTG GACGACGGAG CCGCCTGCCT TGAAGAAAGC
CTGGGCATCA TTCGCCGACT CAAGGCCATG GGACTCAAAG GAGCTTACTG CACCCCCCAT
ATCATGGCGC GCTACCCGGA TAATACGCCC GATTTCCTGC GCCGCCGTTT CGACCAGCTG
CTTGCCGACA CCAGGGAAGA ACAATTCCAG CTTCGGCTCG CGGCGGAATA CATGCTGGAC
AACCAGTTCC ATGAGCAGCT GCGCCGATAC ACTCCCCTGA CCTACGACGG AATCCACCTG
CTGGTGGAAC TGCCCCAGTA CTACCTTCCC GGCGCCTGGA AGGACATGAT CAGCTCCGTT
CGGGACATGG GATACGTCCC TGTCCTGGCG CACCCTGAAC GCTATGGCCG CCTCCTGCAA
CAGGAAGATT TCCTCCAACT GGCCCGGCAG GAAGGCGTCA AATATCAGGG CAATGTCGGC
TCCCTGAAAG GATTTTACGG CAAATCCGCC GCAGCCCTGG CACAAACGTT CCACACCCGT
CAACTTTACG AATGGTGGGG GACAGACAGC CACAACATCG CCATGGCCAA ACGCATGCCT
CTGAAAAACT AA
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| Protein sequence | MFGNLFTPRY ATSSLFPDGM DMHTHILWGV DDGAACLEES LGIIRRLKAM GLKGAYCTPH
IMARYPDNTP DFLRRRFDQL LADTREEQFQ LRLAAEYMLD NQFHEQLRRY TPLTYDGIHL
LVELPQYYLP GAWKDMISSV RDMGYVPVLA HPERYGRLLQ QEDFLQLARQ EGVKYQGNVG
SLKGFYGKSA AALAQTFHTR QLYEWWGTDS HNIAMAKRMP LKN
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