| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2071 |
|---|
| Symbol | |
|---|
| ID | 6274138 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2518313 |
|---|
| End bp | 2520964 |
|---|
| Gene Length | 2652 bp |
|---|
| Protein Length | 883 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642614133 |
|---|
| Product | cytochrome c assembly protein |
|---|
| Protein accession | YP_001878661 |
|---|
| Protein GI | 187736549 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 0.183227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAGGG AACGAACGGA TGCGGTATGG AAAAAATATG GACGCAGCCT CTGGAATTTT
GCCGGAAGCT ACGGCTTAGG CATTGCCCTG ATGCTGATCC TTCTGGTGCT GACCTTTGCC
GGGACGCTGC ACCAGGTGCG GTTGTCTTCT GCCATGGGGT CGGAGGCTGC CATAGAGTCT
TTTTTCGGGG CGGCTTATGT GCTGATACCG CTGGGCGGGG AGAACTCCCT GATTTCCCTG
CCTTTGCCCG GCATGGGCAT TACTTGTGTC CTGCTGTTCG CCAACCTGCT CATAGGCGGG
GTATTCCGTA TCCGGTGGAC CTGGAGGCAC GCAGGCGTGC TGGTGGCTCA TGGGGGAATT
TTGCTGCTGC TGGCCGGCAT CATGCTGGGC AACAAAATGA CGGTGGCTGT GGAACAGGTG
GAACTGCCCC AGGGGGACCG GGTGCACGAG TATTCCCTTC CGTTTGATTT GCGCCTGAAC
CGCTTTGTGC CGGAGTTTTA TCCGGGGACT TCCAAGCCTA AATCCTATGA ATCCCAGATA
ACCGTTTTTC CGGAATCCGG CGGTCAGTAT GACGCCGTTA TCCGCATGAA TGAGCCTCTG
CGCCTTTCCG GCTGGACGCT GTACCAGATG AGCTGGGGCC AGGATTCCCT GCATCCGGGC
AGGCTTATCT CCATTCTCCG TGCTTCCCAT AATCCCCTGG AGCAAATGCC CAAATGGTCC
TCCTACATCA TCGCTGTAGG GCTGCTGTGG CATTTTGCCT GTGTTTTTGG CAGATACCTG
CGCCGCAAAC CCGGTCTGGC ATCTGCCGGA ACGGCGGCGA CGGATGAACT GCAGGCCGTT
TCCGCCCCCG GCGGAAAAAA ACGTCTGCGC CTGGCTGGCA TTTGCCTGCT GGTAGCGGCC
ATCTTCGGCA TCGGCATGCT GGCGGCGCGG CCTGACGTCC ATCCGGTTCT GGTGGAACAT
TATGTGCCCT GGTCTCCCTT TTTGGTGGAG CGGGCCGGGG CCATGGCCGT CCAGGACGGC
GGCCGCCTGA AGCCTGTTTC TACTTATGCG GGCTTCCATC TGCTCCGGAC ACTGGGCAAA
AGAAGCTTTG TTGTTGATAC GCCGGAAGGG AAAAGGAAGC TCTCCCCGGT GGAATGGATG
CTGGACTGCA TGTTCCGTCC GGAACTGGCG GAACAATACC CTGTTTTTCT GGTCAATCGG
GAAGAGGTGG TCAGGCGCCT GCACCTGCCG GACCAGAAAG ACAAGCGTAA AAAATACTCC
TACGCGCAGC TTGCGGAACG CTGGGAGGAA ATGACCCGTG CCGTCCGGGA AATCCGTTTG
CTGGGAGAAA CTAATCTGAC AGAAGCCCAG AAGGAAATTT TGTCCCTTGC CCGCAACTTT
GATGTGATGC GGGGCTGGAT GCTTGTCTCC CGGATCATGC TGGAAAACCC TGCCGCCATG
GAACGGATGG AATTCCCACG CTGGTTTCCT TCTGCCGGCC GCGATGGAGA ACGCCTGTGG
ACGGCTTCCC CGGATAAAGC TGCCGGAGCC TTTTTGGCAA TGGCGTCCCT GCTGGAACGC
AAAGCTATCG GCATGGCAGG GGCGGAGGCT TCCGCACTGC GGATGAAAGC GGAAGGACTG
CTGCTGGAAA AGCTGGCGCA ACCCAATGAA GCCGCCTCCG CCGGAGAGCG GCACAGCCTG
GAAAGAGAAA TTTTCTACTA CCGTCTGGAT CCGCTTTATG TTTCCCTGGC CGTTTTTGTG
GCGGCGTTCG TGTGTCTGCT GCTCTGCGCA CTTTTCCGCC CAGCCGCCAA CGCTCCCCTC
TGGCGGCGTT TTCTCCGGCC CGGAGGTTTC AGCCTGGCGT GGCTGACAGG CGCGGGCGGA
GCCGGAGTGC TGGTTGCGGC GCTGGTCATC CGCGTGCTCA TCACCATGAG GTCCCCGGTG
GGCAACACGT ATGAAACCAT CGCCTTTATC GCCTGCATGG GAGTTCTCTG CGCTCTTGTG
GTGGAACTTT TCAGTAAAAA GGGAATTGTA CTGGCGGCCG GGCTTTTGCT TGGGGCTTTC
TCCTGTCAGA TGGGTATTTT GTATGAATCC TCCCAGGCTG TGGACCATAT GGATCCCCTG
GTGGCCATCC TGCGCTCCAA CTTCCTGCTT TCCACCCATG TCATTACCAT TGTGCTGGGG
TACGCGGCCG GGTTGCTGGC GGCGGTGCTC TCCCATATAT ACCTGCTGGC TTCCCCCTTG
CGCCTGATTG GCGGAAAAAC GGAACAATCC CTGGACCGCA TGGCTTACGG CATCTTGTGT
TTTTCCCTGG TGTTTACGCT GGTGGGAACG GTTTTTGGGG GGATTTGGGG CAATGAATCC
TGGGGGCGCT TCTGGGGCTG GGATCCCAAG GAAAACGGAG CGTTGATGAT TGTACTGTGG
CAATTGACCG TATTGCATGC CCGGAAAGCC GGATGGCTGT CTTCCTGGCT GCTCCACTTC
AGCAATGTAG TGGGCGGCGT TATCATTGCC TTTGCCTGGT GGGGCGTCAA TATGCTGGGA
GTGGGGCTGC ACTCCTACGG TTTCACTTCC GGTCGGGATG CGTTAGACAT GTTCTATTGG
TCCGAAGCTG TATTGTGCGT CCTCTTCATT ATCCTGCATT ACCGCGCGCT CCGGCGCGTA
GATGTCAGGT AG
|
|---|
| Protein sequence | MDRERTDAVW KKYGRSLWNF AGSYGLGIAL MLILLVLTFA GTLHQVRLSS AMGSEAAIES
FFGAAYVLIP LGGENSLISL PLPGMGITCV LLFANLLIGG VFRIRWTWRH AGVLVAHGGI
LLLLAGIMLG NKMTVAVEQV ELPQGDRVHE YSLPFDLRLN RFVPEFYPGT SKPKSYESQI
TVFPESGGQY DAVIRMNEPL RLSGWTLYQM SWGQDSLHPG RLISILRASH NPLEQMPKWS
SYIIAVGLLW HFACVFGRYL RRKPGLASAG TAATDELQAV SAPGGKKRLR LAGICLLVAA
IFGIGMLAAR PDVHPVLVEH YVPWSPFLVE RAGAMAVQDG GRLKPVSTYA GFHLLRTLGK
RSFVVDTPEG KRKLSPVEWM LDCMFRPELA EQYPVFLVNR EEVVRRLHLP DQKDKRKKYS
YAQLAERWEE MTRAVREIRL LGETNLTEAQ KEILSLARNF DVMRGWMLVS RIMLENPAAM
ERMEFPRWFP SAGRDGERLW TASPDKAAGA FLAMASLLER KAIGMAGAEA SALRMKAEGL
LLEKLAQPNE AASAGERHSL EREIFYYRLD PLYVSLAVFV AAFVCLLLCA LFRPAANAPL
WRRFLRPGGF SLAWLTGAGG AGVLVAALVI RVLITMRSPV GNTYETIAFI ACMGVLCALV
VELFSKKGIV LAAGLLLGAF SCQMGILYES SQAVDHMDPL VAILRSNFLL STHVITIVLG
YAAGLLAAVL SHIYLLASPL RLIGGKTEQS LDRMAYGILC FSLVFTLVGT VFGGIWGNES
WGRFWGWDPK ENGALMIVLW QLTVLHARKA GWLSSWLLHF SNVVGGVIIA FAWWGVNMLG
VGLHSYGFTS GRDALDMFYW SEAVLCVLFI ILHYRALRRV DVR
|
|---|
| |