| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2043 |
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| Symbol | |
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| ID | 6274753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2484591 |
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| End bp | 2486024 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642614104 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001878634 |
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| Protein GI | 187736522 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.186335 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACAA ACCCATACAT CACACGCGCC ATCCTGCTGG GAACGGCTTT TGCCGCCTCC
TCCTGCATGA TGGGCCCCGA CTTCAAACCG GTGGACATGC CCATGCCTGC GGCATTCAGG
GGAGCCCCTG CAGCGACGGA ATCCATTGCG GACCTTCCCT GGTGGAAAGT TTTCAAAAAC
AAGGACCTTC AGGACCTCCT GACGGACACC TACAATAACA ACCGCGATTT GAAAGCTACC
ATGGCGCGCG TGGAAAAGGC ACGCCAGTAC ATCACCATCA CGGAGGCCCC GCTCTTCCCG
TGGGCGGATT ATTCCGGCTC CGTCAGCAAA GGCTCCAACT ATACCGGCGG CAGCATCGCC
CAGACTACCG GAACCACACT GACGCCTGGA GCGATTGATG CCGGCATTTC CTGGGAACTG
GATATCTGGG GCAAAACGCG CCGGATGACG GAAGCGGCCC GCGCGGATTA TCTGGCTTCC
GACGAAGGCC AGCGCGCGCT CATGCTTTCC CTGCTCCGCC AGGTGGCGGA CTCCTACCTC
CAGCTCCTCC AGCTGGACGA ACAGCTTGCC ATCGTGCAGA AATCCGTGGA ATCCTATTCC
GAAAGCCTGC GCCTGTTTGA CGAACAGCTT GAAGGCCAGG TAGGCGACAG GCTTCAGGTG
GCTTCCGCCA AGGCGGCTCT GGCCTCCTCC CAGGCCCAGA TTCCCGCCAT TCAGGTGCAA
ATTGCCAATC TGGAAAATGC AGTCTCCGTC CTGGCCGGAC GCGCTCCCGG CCATATCCGC
CGTTCCGGCA GCACCCGGGA CATCGCCTAT AACGTCAAGG TTCCCGCCGG CATTCCGGCC
TACATCCTTT CCAGAAGGCC TGACGTCCGC CAGAGCGAAT ACCAGCTGCG CGCCGCCAAT
GCGGAAGTGG GCGTGGCCAT TGCCAATTAC TTCCCGACCA TCTCCCTGAC GGCGGCGGGC
GGCCTCGCCT CCGCGGATCT GCGCCACGTG CAGGGGCGCC GCGGCGGCTG GGGCCTGGGA
GCCAATCTGA CCGGCCCCCT CTTCCAGGCG GGCAAGCTGA CGGCTTCCGA AAAGGCGGCC
AAGGCCGAAT TCCTGGCGGC CAGAAACGAT TATGAACAAA CGGTTCTCAA TGCCCTGGCG
GAAGTTTCCA GCACGCTTAT CCAGAGGGAC AAGCTGCGCA GCATCACCGC CACCCAGTCC
GAGGCCGTGG AAGCCTACCA CACGGCGGTG AAACTCTCCT TTGAACGCTA CCGCACGGGC
CTTTCCAATT ACATTGAAGT ATTGTACGCC CAGCAGAACC TGTACCCCGC TCAGATTCAG
CTTTCACAGT ATTATTACCA GCACGCCAGC ACGCTGGTTT CCCTGTACAC GGCCCTGGGC
GGCGGCTGGA ACATGAGCCA CAAGGCTATC ATGGACGGCC CTGCCAGGCA GTAA
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| Protein sequence | MRTNPYITRA ILLGTAFAAS SCMMGPDFKP VDMPMPAAFR GAPAATESIA DLPWWKVFKN
KDLQDLLTDT YNNNRDLKAT MARVEKARQY ITITEAPLFP WADYSGSVSK GSNYTGGSIA
QTTGTTLTPG AIDAGISWEL DIWGKTRRMT EAARADYLAS DEGQRALMLS LLRQVADSYL
QLLQLDEQLA IVQKSVESYS ESLRLFDEQL EGQVGDRLQV ASAKAALASS QAQIPAIQVQ
IANLENAVSV LAGRAPGHIR RSGSTRDIAY NVKVPAGIPA YILSRRPDVR QSEYQLRAAN
AEVGVAIANY FPTISLTAAG GLASADLRHV QGRRGGWGLG ANLTGPLFQA GKLTASEKAA
KAEFLAARND YEQTVLNALA EVSSTLIQRD KLRSITATQS EAVEAYHTAV KLSFERYRTG
LSNYIEVLYA QQNLYPAQIQ LSQYYYQHAS TLVSLYTALG GGWNMSHKAI MDGPARQ
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