| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2039 |
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| Symbol | |
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| ID | 6273708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2475865 |
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| End bp | 2477499 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642614100 |
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| Product | putative alpha-isopropylmalate/homocitrate synthase family transferase |
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| Protein accession | YP_001878630 |
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| Protein GI | 187736518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR00977] 2-isopropylmalate synthase/homocitrate synthase family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000986258 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000484057 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACCA AAATCTTTCT CTATGATACT ACGTTGCGGG ACGGCGCGCA GAGTGAAGAC
GTCAATTTGA GCGCGACGGA CAAGGTCCGC ATCGCCCGCC AGCTGGATTA TCTGGGCATG
GATTACATTG AGGGCGGCTG GCCCGGCGCC AATCCGGTGG AAACGGAATT TTTCAACGCC
ATGAGAGGTG TCGGACTAAG GAATGCAAAG CTGGCCGCCT TTGGAAGCAC GCACCATCCT
TCCCATACTC CGGAGACGGA CCCCACGCTG ACCGCCCTGA TATCCAGCGG TGCGCGGGTG
GCCGCGGTTT TTGGGAAATC CTGCCCCCGC CATGTGGAAG TGGCCCTGGG CATTTCCCGG
GAACGCAATC TGGAAATCAT CGGCAATTCC ATTTCCTTCC TTAAGAAAAA TATGGAAGAA
GCCTTTTTTG ACGCAGAACA CTTTTTTGAC GGCTTCAAGC GGGATCAGGA ATACGCCCTG
GCTGTGCTCC GGACAGCCTG GGAACATGGA GCGGACTGCC TGGTGCTGTG CGATACCAAC
GGAGGCACCA TGCCGGAGGA AATCAGCTCC ATTATCAGGA CGGTCAGGGA ACGCCTGCCG
CATGCCCTTC TGGGCATCCA CGCCCACAAT GACTGTGAAC TGGCCGTCGC CAACAGCCTG
GCCGCGGTAA ACAGCGGAGC CATCCAGGTG CAGGGGACCG TGAACGGCAT CGGGGAGCGT
TGCGGAAATG CCAATCTTTG TTCCGTCATC CCCAACCTCC AGGTGAAGAT GAAAGGCTTT
TCCTGCCTCA GCGGCGCCTC CCTGACGCGG CTCAAATCCA CTGCCGCCTT TGTCTCGGAA
GTATCCAATC TGGCGCCTTT CCGGCGGCAG CCCTTCGTGG GGAACGCCGC GTTCGCCCAT
AAGGGCGGAG TGCATGTCAG CGCGATCATG AAGGAAGCCG CTTTGTACGA GCACATCGAC
CCCTCCCTGG TGGGGAACGC CCAGCGCGTG CTGATGACGG AGCAGGGCGG CAGGAGCAAC
ATCCTTTCCC TGTCCCGCAC CCTGGGTTTT GAACTGGAAA AGGGAGACCC CCTTCTGGAC
GTGCTTTCCG CCGCCGTGAA GAAAAATGCC GCGCTGGGGT ATGATTACGT GGCCGCCCCG
GCCAGCGCGG AGCTGCTCTT CCTGCGGCAC ATGCCGGACA ATGCCTTGAA ACCGTATTTC
AACATCCTGC GCACTGTGGT GCTGACCTCA CGCCATGAAA TGGACCCGGA CATGATGGTG
GAAGCCTCCC TCAAGCTGGA TGTCCACGGC AATGTGGAGC ACACCGCCGC CGGGGGCTTT
GGCCCCGTGC ATGCGCTGGA CAGGGCTCTG CGCCGCGCCC TGACGCGCTG GTATCCGGAA
TTGGAGCAGA TGCACCTCAT CGACTACAAG GTGCGCGTGC TTTCCCCCAC CCGGACGAAC
ATTCCGGAGG CGGAGGATGA AAACGGAACC GGCTCCAATG TCCGCGTGCT TATTGAGTCC
TCGGACGGCG TCGCCACCTG GACCACTGTG GGCGTTTCCT ACAACATTAT TGAGGCCAGC
CTGGAAGCCC TGGCGGACGC CGTCACGTAC AAGCTCTACA AGACGGAACA GGCCAGATGG
CGTGCGGAAT GCTGA
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| Protein sequence | MSTKIFLYDT TLRDGAQSED VNLSATDKVR IARQLDYLGM DYIEGGWPGA NPVETEFFNA
MRGVGLRNAK LAAFGSTHHP SHTPETDPTL TALISSGARV AAVFGKSCPR HVEVALGISR
ERNLEIIGNS ISFLKKNMEE AFFDAEHFFD GFKRDQEYAL AVLRTAWEHG ADCLVLCDTN
GGTMPEEISS IIRTVRERLP HALLGIHAHN DCELAVANSL AAVNSGAIQV QGTVNGIGER
CGNANLCSVI PNLQVKMKGF SCLSGASLTR LKSTAAFVSE VSNLAPFRRQ PFVGNAAFAH
KGGVHVSAIM KEAALYEHID PSLVGNAQRV LMTEQGGRSN ILSLSRTLGF ELEKGDPLLD
VLSAAVKKNA ALGYDYVAAP ASAELLFLRH MPDNALKPYF NILRTVVLTS RHEMDPDMMV
EASLKLDVHG NVEHTAAGGF GPVHALDRAL RRALTRWYPE LEQMHLIDYK VRVLSPTRTN
IPEAEDENGT GSNVRVLIES SDGVATWTTV GVSYNIIEAS LEALADAVTY KLYKTEQARW
RAEC
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