| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2029 |
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| Symbol | |
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| ID | 6275503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2462442 |
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| End bp | 2463578 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642614090 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001878620 |
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| Protein GI | 187736508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.109803 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.00040221 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAC ACACGCATCA TCGGAAGGCG CCCCTCCGCC TGCTGGCCGG TTCCGGCCTG
CTTTTTTCCC TGTTTGTTCC GGGTTATTCC CAAGGAACGC CGGGAGGGGC TGCAGCCAAA
CCCAGTACCG TACTCGTCCA GAAAGCCGCC GCTATTGACA GCGCGGTGAA CAAGAAGTAC
ATCGGCCAGG TGGAAGCCAT TGACCGGGTG ACTGTGCAGC CCCGCGTCTC CGGCAACATC
GTAGCCACCC GTTTCCGGGA AGGAAAGGTC GTGAAGAAGG GGGATCTCCT GTTCGAAATT
GAGGATACGC GCTACAGGGC GGCTGTGGAG GAAGCGGTAG CCAAAAAGGC CCAGCTTGAA
GCCAAACTGC TTTACGCAAA AAATAGTTTT GAACGCTATA ACAGGTTGCT GGCCTCCAAA
TCCGTCTCCA TGGACACGGT GGAAAACGCC AAGAGCACCA TGCATGCCCT GGAAGCGGAA
ATCCAGTCCG CAAACGCCGC CATTACGGTA GCGAAGGACG ATCTTAACTA TACCAGGCTC
ACGGCTCCCA TCACGGGCCG CACAGGCCGC GTCACCTTTT CCACGGGCAA TTACATCACC
CCCACCTCCG GTTCCCTGGT GACCATTACA GGCATCGATG AAGTGTACGT GAAGTTCCCT
ATCAGCGAAC GCGATTTCCT TTCCCTGTTC GGTACCCAGG AAAATATGAA GAAAGACGCC
CTTGTGTCCG TCAACCTCGC CAACGGCAAG GCATACGACC AGCCGGGCAG GATTTTCATG
ACGGACAATA CCGTCCAGAC GACCACGGAC ACCCTGAATG TCTGGGCAAA ATTCCCCAAT
CCGGAAGACG TGCTGACGCC CGGCGGCGTA GTCACGGTTA ATCTTTCCAA GAAAAACGTG
GACCGCTTCC CGGCTGCCAA CATTTCCTCC GTGATGCACG ATGCCTACAA GAGCTACGTT
TACATCGTCA ACGACCAGGG CGTCGTGGAA CGCCGGGACG TTACGCTGGG CAACACGGTC
AATAATGAAC AGTGTTTCAG TTCCGGCGTT AAGGAAGGGG AAGTCGTCAT CATCGACGGC
ATGCACAAGG TGCGTCCCGG CGCCAAGGTG AATCCGGTAT ATTCCGTTCA AAACTGA
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| Protein sequence | MKKHTHHRKA PLRLLAGSGL LFSLFVPGYS QGTPGGAAAK PSTVLVQKAA AIDSAVNKKY
IGQVEAIDRV TVQPRVSGNI VATRFREGKV VKKGDLLFEI EDTRYRAAVE EAVAKKAQLE
AKLLYAKNSF ERYNRLLASK SVSMDTVENA KSTMHALEAE IQSANAAITV AKDDLNYTRL
TAPITGRTGR VTFSTGNYIT PTSGSLVTIT GIDEVYVKFP ISERDFLSLF GTQENMKKDA
LVSVNLANGK AYDQPGRIFM TDNTVQTTTD TLNVWAKFPN PEDVLTPGGV VTVNLSKKNV
DRFPAANISS VMHDAYKSYV YIVNDQGVVE RRDVTLGNTV NNEQCFSSGV KEGEVVIIDG
MHKVRPGAKV NPVYSVQN
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