| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2028 |
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| Symbol | |
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| ID | 6275430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2461965 |
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| End bp | 2462435 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642614089 |
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| Product | transcriptional regulator, MarR family |
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| Protein accession | YP_001878619 |
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| Protein GI | 187736507 |
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| COG category | [K] Transcription |
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| COG ID | [COG1846] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.400753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.000427569 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCTTCAGA CTGCCGCGGA TATCACAGCC TCCGTTCACA AATTCGAGAC GATCCTTCAC
CAGTTCAAAA GGGATAACCT GAATGAGGTG GACCAGAGCC ATTACCAGAA AATCATGGGG
CTTTCCGTCC GGCAGATGAA CGCCCTGGGT GCCCTGAACC ACCTGATGAC CAACCGCCAG
GAAGGCATTC CCCTGAAAGA GCTTGCCCAT TATCTCCGCA TGAGCATTCC CTCCACCTCC
CTGCTGGTGG ACAGCATGGT GAAGAAAGGC CTGTTCGACC GCAAGGAGAA TCCCCGCGAC
AGGCGTTCCC TGTGCATCCG CCTTTCCGAG GAAGGCGAAT CCAGGTTCCA GATGCTTTTC
AACGGCATGA AGGAAAAACT GGATACCCTG TTCAGCACTC TGTCGCAAGA GGACAAGGAG
AATTTCTGCC GTATTGTGGA TACCCTTTAC AACCACGTTT ACAGTAAATA A
|
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| Protein sequence | MLQTAADITA SVHKFETILH QFKRDNLNEV DQSHYQKIMG LSVRQMNALG ALNHLMTNRQ
EGIPLKELAH YLRMSIPSTS LLVDSMVKKG LFDRKENPRD RRSLCIRLSE EGESRFQMLF
NGMKEKLDTL FSTLSQEDKE NFCRIVDTLY NHVYSK
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