| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2025 |
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| Symbol | |
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| ID | 6274679 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2458357 |
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| End bp | 2459559 |
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| Gene Length | 1203 bp |
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| Protein Length | 400 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642614085 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_001878616 |
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| Protein GI | 187736504 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.000222317 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTATTTT CAGAATTAGG TTTATCGGAA CCCGTCTTGA AGGCGGTGGA GAAATGCGGT
TATGAACATC CCACCCCCAT TCAGGAGCAG GCCATTCCCA TCATTCTGGA AGGCAGGGAC
CTCATTGGGG CCTCCCAGAC GGGGACGGGG AAAACCGCTG CTTTCGCCCT CCCGCTGCTG
ACAAGGATTC AGCCCATCGG CAAACCTCAG ATACTGGTGC TGGAACCCAC CAGGGAACTG
GCCGACCAGG TGGCGGAATC CTTTGCCGAA TACGGTGAAT TCACCGGGTT GAAAGTAGCG
TTGCTGTATG GCGGCGTGGG GTACGGAAAG CAGACGGAAG ACCTGAAAAA AGGGGCGGAC
ATCGTTGTGG CCACTCCCGG CCGGCTGGTG GACCACTTCT ACCGCTGCAC CATGCGCTTC
GGAGAAGTCA AGGCCCTGGT TCTGGATGAA GTGGACCGAA TGCTGGACAT GGGGTTCCTG
CCCATTGTCC GTAAAATCGT CAACCTTTGT CCGTGGGAAG GAAGGCAAAC CCTCTTCTTC
TCCGCCACCA TGCCTCCGGT CATCGCGGGA TTTGCCAAAT GGTGCCTGAC GGACCCTGCG
GAAGTTACCA TCGCCCGGCG TGAAGTGGCC GCCACCATCA GCCATGCCTT TTATCCGGTA
GCTCTGGACC AGCGGGATGA ACTGCTGTTG GCCCTGCTCA AGGGGACGGA CTTCCGTTCC
GTCATGATTT TCACCCGCAC CCGCAAGGAG GCGGACGCGG TATGCGGCAT GCTCAAGCAT
CATGGCTACC GCGGGGAGGT GGCCGTCATG CACTCCGACA TTCCCCAGAA GGAACGCATG
GAGGCGCTTA AGGGATTCAA GAGCGGAAAA TATGATATTC TGGTGGCTAC GGATGTGGCG
GCGCGCGGCA TTGACATCAG CGGTGTGACC CACGTCATCA ACTACCGCGT TCCGGAAAAC
GCGGAAGACT ATGTGCACCG CATCGGCCGT ACCGGCCGCG CGGAAGCTTC CGGGGATGCG
TTCACGATCA TGACGGCGGA TGAGCTGGAT TTTGCTGCGG CTGTGGAAAA TTTCATTGGG
AAACCCATTG AACGCAAAAA ACTGGACGGG TTCAACTACA CGTACACCGC CCTGTTGGAA
GACAAGCCCG TCAAATCCGT CCGCAAGCCC AAACCCGCAG GTCCCAAGCG CCGCAGGCGC
TAA
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| Protein sequence | MLFSELGLSE PVLKAVEKCG YEHPTPIQEQ AIPIILEGRD LIGASQTGTG KTAAFALPLL
TRIQPIGKPQ ILVLEPTREL ADQVAESFAE YGEFTGLKVA LLYGGVGYGK QTEDLKKGAD
IVVATPGRLV DHFYRCTMRF GEVKALVLDE VDRMLDMGFL PIVRKIVNLC PWEGRQTLFF
SATMPPVIAG FAKWCLTDPA EVTIARREVA ATISHAFYPV ALDQRDELLL ALLKGTDFRS
VMIFTRTRKE ADAVCGMLKH HGYRGEVAVM HSDIPQKERM EALKGFKSGK YDILVATDVA
ARGIDISGVT HVINYRVPEN AEDYVHRIGR TGRAEASGDA FTIMTADELD FAAAVENFIG
KPIERKKLDG FNYTYTALLE DKPVKSVRKP KPAGPKRRRR
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