| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2019 |
|---|
| Symbol | |
|---|
| ID | 6274491 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2452124 |
|---|
| End bp | 2453638 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642614079 |
|---|
| Product | Beta-N-acetylhexosaminidase |
|---|
| Protein accession | YP_001878610 |
|---|
| Protein GI | 187736498 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.00758955 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGAAT CTTTTCCGAA ACAGTTCTTC ATGATGTTTA AACTGCCCCT CATCCTGGCC
TGCGCCATTT TTTCCGCCCA CATGGCATGT GCCGCCGCAG CGGACAAATA CAGCGTTATC
CCTGAACCGG AAAAAACGGA GCTGCAGCAC AACAGTACCA GAACCTTAAA ACTTCTTTCC
GACCAGGAGG CTCCGACCCT GGGAACGGAC GCCTACCGGC TCACAGTCAC CCCGCAGGGG
GCGCACCTTG CTTCCGGAGG AAGGGAAGGC AGAATTTACG GGCTGGCAAC CCTCCGCCAG
CTCCGGGACC AGCTGGCGGG ACAGCCGGAG GGCATCCCCT GCGGCGTCAT CACGGACAAG
CCGCGCTATC CGTGGCGCGG CCTCATGGTA GATCCCGCAC GCTTTTTCAT CCCCACGGCC
GATCTGAAAA AATTTGTGGA TATGATGGCC TACTACAAAT TCAACAAGCT CCAGATCCAC
TTGACGGACG ACCAGGGGTG GCGTCTTCCG GTGCCCGGCT ACCCCAAACT CAAAAGCATC
TCCTCCAAAC GGAAAGAAAG CATGCGCAAC GGAATCCCCC ATGAAGGGAT GTACACCAAA
CAGGAACTGA AAGAGCTGGT GGCGTACTGC GCAGCGCGCG GCATTGAGGT CATCCCTGAA
ATAGACGTGC CGGGGCACAA CCAAGCCCTG GCGGCAGCCT ACCCTGAATT CTTCTGCTTC
CCGAACCCGG ATACGAAAGT GAAGACCGAT GAAGGCGTCA CCCTCCACCT CATCTGCCCG
CATAAACCGG AAGTCTGGAA ATTTTATGCC GCTGTTTTCA AGGAACTCAA AGATATTTTC
CCGTCCGGCA TCGTCCATCT GGGCGGCGAT GAAGCACCCC TGGAAAAAAC CTGGGCCAAA
TGCCCCCTCA GCATCCAGTA CCGGGAGCAA AAAGGCATGA AGGACGTCCA CGAGGAATTG
AAGGAATTCA TCAAAAAAAT GTCCTCCATG CTGGCTGTTC ACGGCAAGCG CATCCAACTA
TGGTATGAAA AACCGTGGGC CAGGGCCAAC ATCTACAACA AAGGAGACAC CGTCTTCACC
TGGCGCATGG GACTGACACC GTCCACCATC ACGGAGACGA AAAAGCAGGG GCTCTCCCTG
ATCATTGCTG CCGGGGAATA CTGTTACCTG GACTATCCGC AACTTCCAGG GCAAAGCAAC
CGGGGATGGA TGCCCACCAC CACGCTGGAG CAAAGCTACA GGCTGGACCC CGCCTACGGC
AGACCAGAAA AGGAAACAAA CCATATCACC GGCGTTCAGG GCACCGTGTG GGGAGAACAT
CTCCCTACCC TGAACCACAT TCTCTACCGC GCCTATCCGC GTGCCTGCGC CATTGCGGAA
GCCGGCTGGT CACCGATGAA CGTGCGCTCC TGGGAAAACT TCCGGCGCAA GCTGGCCGAC
CACCGTCAAT TCATCCTCAA ACGCTTCAAT TATGATATGG AGCGCACCAA AGAAAACGAA
CCGCCTTTCA AATAA
|
|---|
| Protein sequence | MVESFPKQFF MMFKLPLILA CAIFSAHMAC AAAADKYSVI PEPEKTELQH NSTRTLKLLS
DQEAPTLGTD AYRLTVTPQG AHLASGGREG RIYGLATLRQ LRDQLAGQPE GIPCGVITDK
PRYPWRGLMV DPARFFIPTA DLKKFVDMMA YYKFNKLQIH LTDDQGWRLP VPGYPKLKSI
SSKRKESMRN GIPHEGMYTK QELKELVAYC AARGIEVIPE IDVPGHNQAL AAAYPEFFCF
PNPDTKVKTD EGVTLHLICP HKPEVWKFYA AVFKELKDIF PSGIVHLGGD EAPLEKTWAK
CPLSIQYREQ KGMKDVHEEL KEFIKKMSSM LAVHGKRIQL WYEKPWARAN IYNKGDTVFT
WRMGLTPSTI TETKKQGLSL IIAAGEYCYL DYPQLPGQSN RGWMPTTTLE QSYRLDPAYG
RPEKETNHIT GVQGTVWGEH LPTLNHILYR AYPRACAIAE AGWSPMNVRS WENFRRKLAD
HRQFILKRFN YDMERTKENE PPFK
|
|---|
| |