Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_2012 |
Symbol | |
ID | 6275759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | + |
Start bp | 2445146 |
End bp | 2445589 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642614071 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_001878603 |
Protein GI | 187736491 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0939301 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 0.0319849 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGAAGG TTTCCACCAG AGGACGTTAC GCGCTGCGCC TGATGATTGA CCTCGCCCAG CACCGCGACG AGGGTTACAT CTCCCTGAAG GAGATTTCCG CCAGGCAGGA CGTTACCGTA CGTTATCTGG AACAGATTAT CGCCATCCTT TTGAAAGCGG GATTCGTCCA GAGCTTCCGG GGAAAGGCCG GCGGATACCG CCTTTCCAGG CATCCGCGCG AATATACTAC GGAAGATATC CTGAAACTGA CGGAAGGCTC CCTCCTGCCC CTTTCCTGCA CGGCTTCCCA CGAGAATCCG TGCCCGCGGG CGGCCGGCTG CGCCACGCTG CCTTTCTGGC GCGGGCTGCA ACAAGTCATT GAGAATTATT TGCGTCGCGT AACGCTGGAA GATCTGGCCG AACAGCAGAA GGAAATCGGC TGCGACTACG GAGCAGGTAT TTAA
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Protein sequence | MMKVSTRGRY ALRLMIDLAQ HRDEGYISLK EISARQDVTV RYLEQIIAIL LKAGFVQSFR GKAGGYRLSR HPREYTTEDI LKLTEGSLLP LSCTASHENP CPRAAGCATL PFWRGLQQVI ENYLRRVTLE DLAEQQKEIG CDYGAGI
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