| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_2011 |
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| Symbol | |
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| ID | 6275760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2443943 |
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| End bp | 2445049 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642614070 |
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| Product | alanine racemase |
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| Protein accession | YP_001878602 |
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| Protein GI | 187736490 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0787] Alanine racemase |
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| TIGRFAM ID | [TIGR00492] alanine racemase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.146422 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0449726 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAGCAA CCAGCCCTCC CCGCGCCTGG GCCGAAATCG ACCTTGGGGC CATCCGCCAT
AACCTGAATG TCGTCAAACA GGCGGCCAAA GGGGAATATT ACATGCCCGT CGTGAAGGCC
GGCGCCTATG GCCACGGCCT GGAACAGGTT TGCCGCACGC TGGATTCGGA AGGCATCGCT
TTCTTCGGGG TGGCCAATGT GGGAGAAGCC CGGCGCATCA GCCAGGCGGG CTGCCGCACC
CGCCCTTACA TCCTGGGCCC CGCGTTCCCG GAGGAACGGG AGGAAATCGT GCTGAACGGC
TGGCGCTCCT TCATTTCCAC CATGGAGGAA GCCGCGCATT ACAATTCCCT GGCGCGGCTG
TACGGAAAGA CGCTGCCCAT CCACCTTTCC GTGGATACGG GAATGGGCCG CGGCGGATTC
CTGCCGGACC AGCTTGAAGA ACTGCTTTCC CGCCTGGGAG AACTGGACAG CCTGCATCTG
GAAGGCCTGG GCGCTCACCT TCCCTGCGCG GACGAGGACC GGGAGATTAC GCTCAGGCAA
ATCTCCCGCT TTGAACAGAT GGCCGCCCGC ATCCGGGAAA AACTGCCTTT GAAGTACTGC
CACCTGGCCA ACAGCGCCGC CTCCCTGGAT TATGAAATTC CCTCCAACAA CATGTGCCGC
CCCGGCCTGG TGCTGTACGG TTTTTCCCCC ATTCCCTCCC CATGGGCCGC GCAATTGAAG
CCGGCCATGG CCCTTTTTTC CCGCCTGACG GTGGTGCGCA CGCTGCCGGA AGGCCACGGC
ATTTCCTACG GGGGTACCTT TGTGACGGAC CACCCCACCA GGGTGGCGAC CGTAGGCATA
GGCTATGCGG ACGGCTACCT GCGTTCCCTG GCCCACAAGG GCGCCCGCGT CATGGTGGAC
GGCGTTTCCT GCCCCCTTCT CGGGCGCGTG ACGATGGACC AGATCATGGT GGACGTCAGC
CGGGCGCCGC ACGCGGAACC GGGCATGACC GCAGAAATCA TGGGGCCGCA TATCCCCGTG
ACGGAACTGG CGGAAAAGGC CGGCACCATT TCCTGGGAGA TTTTTACCGG AATAGGCCCC
CGGGTACCCC GCCACTACAC CCACTAA
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| Protein sequence | MPATSPPRAW AEIDLGAIRH NLNVVKQAAK GEYYMPVVKA GAYGHGLEQV CRTLDSEGIA
FFGVANVGEA RRISQAGCRT RPYILGPAFP EEREEIVLNG WRSFISTMEE AAHYNSLARL
YGKTLPIHLS VDTGMGRGGF LPDQLEELLS RLGELDSLHL EGLGAHLPCA DEDREITLRQ
ISRFEQMAAR IREKLPLKYC HLANSAASLD YEIPSNNMCR PGLVLYGFSP IPSPWAAQLK
PAMALFSRLT VVRTLPEGHG ISYGGTFVTD HPTRVATVGI GYADGYLRSL AHKGARVMVD
GVSCPLLGRV TMDQIMVDVS RAPHAEPGMT AEIMGPHIPV TELAEKAGTI SWEIFTGIGP
RVPRHYTH
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