Gene Amuc_2003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_2003 
Symbol 
ID6274545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2434984 
End bp2435793 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content56% 
IMG OID642614063 
ProductIon transport 2 domain protein 
Protein accessionYP_001878595 
Protein GI187736483 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.191416 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCC ACGTTCTATT CCTGAGGCTG GCCTATCAAG CGGGCATGTG CCTGCTGGCC 
CTGGTCGCCG TAACGCTGAC CGCCATTGAC CTGACAACGG AAGCGGCGGA ATGGGAAGTC
ACGGCGGACC GCATCATCTA CTGGATTTTT GTGCTGGATT ATGTGATCCG CTTCTCCATC
AGCCGGTCCA AATGGCTCTT CGTTAAAGAA CACCCCTGGG ATTTGCTGGC CATTATTCCC
TTTGACGCCC TGTTCCGCCT GTTCAGATTC GCCTCGCTGG GAGAAATCTT AAGGCTCGCC
AGATATCTGG ACCTGTTTTC CTATGCCATG AGGTTCACCA CGCGCATCCG GCGTTTCTTC
AACACGAACG GATTCAAGTA TATCTGCATC GCCGCCCTGG TCATCATCCT GCTGGGGGCC
GTAGGCATCC ATCTGGCGGA AGGCATGAGC CTGCCCAACG GCATCTGGTG GTCCTTCGTC
ACGGCTACCA CGGTAGGCTA CGGGGATACC TATCCGGTCA CCACTTCAGG CAAATTCCTG
GCTGTATTCC TGATGCTCAC GGGCATTGGA TTCGTGGGAA CGCTCACCAG CACCATCACT
TCCTTCTTTC TGAGTCCCCA CGGCGGAGAA GCGCTGCCGT ACCGGGAGGA GGAAATTGAG
GCCATCAAAA AGAAACTGGA CGACCTTTCC TCCATGACGG ATGAAGACAT AGACACCATG
GCGGCCCTGC TGAAGACCCT GCGGGACGCA TCCTCGGCAC CTCCAGCGGA AAAAGAGGAA
ACGCCTGATA TCCATTCCGG AAAAAACTGA
 
Protein sequence
MPRHVLFLRL AYQAGMCLLA LVAVTLTAID LTTEAAEWEV TADRIIYWIF VLDYVIRFSI 
SRSKWLFVKE HPWDLLAIIP FDALFRLFRF ASLGEILRLA RYLDLFSYAM RFTTRIRRFF
NTNGFKYICI AALVIILLGA VGIHLAEGMS LPNGIWWSFV TATTVGYGDT YPVTTSGKFL
AVFLMLTGIG FVGTLTSTIT SFFLSPHGGE ALPYREEEIE AIKKKLDDLS SMTDEDIDTM
AALLKTLRDA SSAPPAEKEE TPDIHSGKN