| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1998 |
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| Symbol | |
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| ID | 6275724 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2425874 |
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| End bp | 2428393 |
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| Gene Length | 2520 bp |
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| Protein Length | 839 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642614058 |
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| Product | phenylalanyl-tRNA synthetase, beta subunit |
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| Protein accession | YP_001878590 |
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| Protein GI | 187736478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0072] Phenylalanyl-tRNA synthetase beta subunit |
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| TIGRFAM ID | [TIGR00472] phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.448786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTT CCCTTAACTG GCTTTCCCAG TACATTGACC TGTCCGGCCT GAGCGTGGAT
GAAATGTCTG ACATGCTGAC TTTTGCCGGC ATTGAGGTGG AAGACATCCG CCAGCAGGGC
GTGGATTCCC CATACGTGGT GGTGGCCCGC GTGGCTTCCG CGGAACAGCA TCCCCAGGCG
GACCGGCTGA AAGTCTGCCA GGTGGACGTG GGCGACGGCA CGCTGCACCA GATTGTGTGC
GGCGCTCAGA ACTACAAGGT GGGGGACAAG GTCCCCTGCG CCCTGCCGGG AGCGGTGCTG
CCCGGCAACG TTGAAATCAA GGTGGGCAAG CTGCGCGGCG TGGAGTCCCG CGGCATGCTC
TGTTCCGCCT CCGAGCTGGG GCTTCCCGAC AAGGAGCACG GTCTCTGGAT TCTCCCTCAG
GAACTGGAAC CCGGTACGCC GATTTCCCAG GTTGTCAAGG CGGATACCCT GGTGGAAGTG
GAAGTAACGC CCAACCGGCC GGATTTGCTT TCCCACAACG GCATGGCGTA TGAACTGGCC
GCTATCTCCG GCCGGGGGTA CAGGCCTGTT TCCATTGACG ACGCCGGAGT GGCGCTGGAA
CCTGCCGGAG ACTTCGTGCG GCTGGACCAG CCGGAGCTGA ACCCGTACTA CACCGCCGTA
AAAATCAGCG GCGTGAAAGT GCAGGAAAGC CCGGAATGGC TGAAGGAACG CCTGGTAGCC
GTCGGCCTGC GCCCCATCAA CAACATCGTG GATATTACCA ACTTCGTCCT GCATGAACTG
GGAACGCCCC TCCATGCCTT TGACGCGGCG AAAGTGCAGG GCGGCATCGT CACCCGCACC
GCTTATGAAG GGGAAACCAT CAAGGCCCTG GACGGGCAGG AATACACGCT TAACTGCACG
GATCTGGTTG TTGCGGACCA GTCCGGCAAG GCGCTCGCCA TCGGCGGCGT GATGGGTGGG
GAGGAAAGCG GCGTGACGGA CGCCACTACG GATATCATTC TGGAGTCCGC CTGGTTCAAG
CCCTCCTCCG TCCGCGCCAC GTCCCGCAGG CTGGCCCTGT CCTCCGACTC TTCCTACCGC
TTTGAACGCG GCACTTCCGC CTGGAATGTC CTGCGCGGTT CCGTGCGCGC CGTGGAACTG
ATTCTTCAGC TGGCGGGCGG AACGGCCTCC CCAACGTATG TGGCCGGTTC TCCCGTTCCT
AATCCGGCTC ATGCTTCCAT GCCTTCCTGC GGAGGGGCGG ACGGCCCCGT TTCCGTGTTC
GCTTCCCTGA AGCAGGGGAA GGGCGCCACG GTGACTAATG AACTGGGCTT TGTACAACTT
CCCTGGAAAG CGCTGGATCA GATTTCCGGC GGTTCCATTT CTCATGAGGA AGGGACTCGC
ATCCTGACGG CGCTGGGCCT GAAGCAGGTT CCGGATTCAC CGGAATGCTG GCTGATCCCC
CCCCACCGCC TGGATCTCAC GCGCCCGTGC GACCTTCTGG AGGAAATCGT GCGCGTTTTC
GGCCTGGACG GCATACCGTC CCGCTTCTCC GGCCCCTTCG TGGCGGAATC CCCGGTAGAT
GTGGCCTATA ACTTCCAGAT GGAGCTGCGC CGCAAGCTGG CGGCCCTGGG ATTTTATGAA
ACCCAGACCA TCAAGCTCAT CGCCTCCGAA TCCGCGGACG GCACCATCGC CCAGGTGAAG
GACGCTTTGC CTCTGCGCCC CCTTCAGGAC GGTGACCTCA TCCGCGTATC CCTGCCGCTC
AGCGAGGATC ACTCCGTGCT GCGCCCCGCC CATACGCCCG GCCTGATTGC CGCCGCCGTG
CGCAACAGCA ACCAGGGCGT TTCCGGCCTG CGCTTCTTTG AACTTGGACG CGTCTTCCGC
AATACGGGCG GCGGCAAGGG CAGGGACATT GAAACGGATA CCCTGGGTAT CCTGGTTTCC
GGGGACCGCA CGGCGCGTTC CTGGGCGGAT CCCAGGCCGG AGCAGGCCTC CTTTGAGGAT
CTGCTGGCCG TGATGGCGGC TCTGGCGCCG GGCCACCGTT TTACGCTCAC GCCTGCCAGA
CCGCGCGAAC AGGCCGCCCT GGGGGCGGAC GTACAGCTGG ACGGGAAAGC CTGCGGCTAT
TTCGCCCGCC TGTCCCTGGC GCGTTGCCGG GAGCTGGGCC TGGGTCAGCC CGTGTACGTG
GCGGAACTGG ATCTCCGCAA AATGCAGGAA ATCCTGACCG CGCCCGTGAA GGCTGCGGAA
TTGCCCCAGT TTCCCGGTTC TTCCCGCGAT GCGGCCATGG AACTGCCCCT CTCCACGCCC
AATGCGGACA TTGTCAAGGC CGTGGAATCC GCACGGGAAA AACTGCTTGT CAGTTATTTC
TGCTTTGACG TGTTCACGGA CCCCTCCGGC GAAAAGCTGC CGGCGGACCG CAAATCCATT
GCCTATACCT TCCTGTACAG GGATCCGGCC AAGACCCTCA CGGCCGCGGA AGTGGATGCA
GCGCACCAGC GCGTGCTGAA AGCCCTGACG GACAAAGTGA AGGGCCTTTC CTTCAGGTAA
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| Protein sequence | MKISLNWLSQ YIDLSGLSVD EMSDMLTFAG IEVEDIRQQG VDSPYVVVAR VASAEQHPQA
DRLKVCQVDV GDGTLHQIVC GAQNYKVGDK VPCALPGAVL PGNVEIKVGK LRGVESRGML
CSASELGLPD KEHGLWILPQ ELEPGTPISQ VVKADTLVEV EVTPNRPDLL SHNGMAYELA
AISGRGYRPV SIDDAGVALE PAGDFVRLDQ PELNPYYTAV KISGVKVQES PEWLKERLVA
VGLRPINNIV DITNFVLHEL GTPLHAFDAA KVQGGIVTRT AYEGETIKAL DGQEYTLNCT
DLVVADQSGK ALAIGGVMGG EESGVTDATT DIILESAWFK PSSVRATSRR LALSSDSSYR
FERGTSAWNV LRGSVRAVEL ILQLAGGTAS PTYVAGSPVP NPAHASMPSC GGADGPVSVF
ASLKQGKGAT VTNELGFVQL PWKALDQISG GSISHEEGTR ILTALGLKQV PDSPECWLIP
PHRLDLTRPC DLLEEIVRVF GLDGIPSRFS GPFVAESPVD VAYNFQMELR RKLAALGFYE
TQTIKLIASE SADGTIAQVK DALPLRPLQD GDLIRVSLPL SEDHSVLRPA HTPGLIAAAV
RNSNQGVSGL RFFELGRVFR NTGGGKGRDI ETDTLGILVS GDRTARSWAD PRPEQASFED
LLAVMAALAP GHRFTLTPAR PREQAALGAD VQLDGKACGY FARLSLARCR ELGLGQPVYV
AELDLRKMQE ILTAPVKAAE LPQFPGSSRD AAMELPLSTP NADIVKAVES AREKLLVSYF
CFDVFTDPSG EKLPADRKSI AYTFLYRDPA KTLTAAEVDA AHQRVLKALT DKVKGLSFR
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