| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1984 |
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| Symbol | |
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| ID | 6274023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2408273 |
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| End bp | 2410327 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642614044 |
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| Product | Methylmalonyl-CoA mutase |
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| Protein accession | YP_001878576 |
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| Protein GI | 187736464 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain
[TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.611894 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0597183 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACAGG GAAATAAAAC AACGGCTCCG GAAATTGATT TCGGAGAATT CGCACCAGCC
ACATACGCCG AATGGCGCGA GGCAGCAGTC GCTGCCCTGA AAGGGGCTGA TTTTGACAAA
AAGCTTTTTA CCAAGCTTGT GGAGGGAATT ACCCTGCATC CCATCTATAA CAAATGGGAT
GAACATTCCC CGGTAATGCC TGCCGGGCAA TTTCCGTACC GCCGCGGAAC GCGCGCCCTG
GGCTATATGG AAAAGCCCTG CGAAATCGCC CAGAGCATTC CCGCTTCCTC TCCGGAAGAC
TTCAACGCCA AGCTTCTGCA TGACCTGGAC CGCGGCCTGA CCGCCGTAAA CGTTCAGCTC
AACTGCAAAT GCGGCCTGAA GCTGCGCAAG CAGGCTGACT GGGATGCGGC CCTCAGGGGC
GTCCGGCTGG ACGGGCTTCC CGTATATGTC ACTCCCGGTT CCTGCGGCCT GGGAACCCTC
TCCATGTTCC TGAACACCTG CAAGGCCGCC GGCGTCAAGA CGGCGGACCT CAAGGGCGGC
GTTCTGTATG ACCCGGTGGG GAAAGCTGTG ATGAAGGGCT CCCTTTGCGG GGGGAAGGGC
ATCTGCGCCT ACTATGACCA GATGGCCGTG ATGACCAAAT GGGCTGTTGC CAACGCTCCC
GGCTTCCAGA CCATCGGCGT CAGCGGGCTG CCTTACGCGG ACTCCGGAGC TTCCGCCTTT
GAGGAAGTGG GCGCCATGCT GTCCACTGCC GTGGCCTACC TGCGCGCCAT GGAGGAACGC
GGCCTCTCCG TGGATGAAAC TGCGGCGCAC ATGCGCTTTA CGGTTTCCAT CGGCGCCAAC
CTGTTCCTGG AAATCGCCAA AATCCGCGCT CTGCGCGAAC TTTGGGCCAT CATCGTAAAA
GAATGCGGCG GCAGCGAGGA AGCTGCCAAA ATCAAGCTCC ATGCCCGCAC CTCCTTCTGG
ACCCTCTCCA AGGTGGATCC CTGGGTCAAC CTGCTGCGCG GCTCCGCCCA GGCGTTCTCC
GCCATCATGG GCGGCGTGGA CAGTATTGAC GTTCTTCCCT TTGACGCTGC CGTGCGCATG
CCGGACGAAT TCTCTCGCCG CATTGCCCGC AACTGCCCGC TGATTCTGCT GGGCGAATGC
AATCTGGACA AGGTCGTTGA CCCCGCCGGC GGTTCCTGGT ACCTGGAAAA CCTGACGGAT
GAAGCCTCCC GGAAGATATG GGAATTCTTC CAGGGCATCG AAAAGGAAGG CGGCATCGTC
AAGGCCCTCA AAGCCGGCAG CATCCAGAAG AAGGTGAACG CCACCGCCGC CAGGCGTTAC
GAGCTGGCGG ACCAGCGCCG GCAGTCCATC GTGGGCGTCA ACCAGTATGT CAACCTGGCG
GAGAAAAAGC TGGAAGTTCC GGAAGGCTCC TGCTGTTCCG CCCACAAGGG CCACGGCTGC
TGCAAGAATG CGGATATTCA GCTCCCGGTC GTGGAAATGA GCGTGGACTC CGCCTGCAAG
GCCGCCGAAG AAGGCTTTTC CACCTGCCTT ATCAACAAGG CCCTGGTGGC CGGCGCTGAC
TGCAAGTGCG GCGAACCCCT GGAAATGGAA GCCCTGCCGA AGCGCCGCCT GGCGGAACGT
TTTGAATCCC TGCTCGCCAA GGCTGACGCC TGGGTGGCAG AAAAGGGTTC CCGCCCGATG
GTCTTCTTCG CCAACATGGG GCCGCTCCGC CAGCACAAGG CCCGCGCGGA CTTCTCCCGC
GACTTCCTGC GCGCCGGCGG TCTGGATGTG GTTTATCCGG CCGGCTTCCA AACTCCGGAA
GACGCGGCCA GGGCAGCTGC GGAAAGCGGC TGCGCCGTGT GCGTCATCTG CTCCACGGAT
GACACTTATC CGGAAATCGT CCCCGCCTTC TGCAAGGCTC TCAGGGAGAC CAGACCGGAC
ATGATGGTGG CCCTTGCCGG TTATCCGGCC GACTATGTGG AAGCATTCAA GGAAGCCGGC
GTGGACATCT TCATCCACGT CAAGGCCAAC TGCTACAACA CCGTTGAAGC CATTCAAAAC
AAAATCGGCC TTTAA
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| Protein sequence | MQQGNKTTAP EIDFGEFAPA TYAEWREAAV AALKGADFDK KLFTKLVEGI TLHPIYNKWD
EHSPVMPAGQ FPYRRGTRAL GYMEKPCEIA QSIPASSPED FNAKLLHDLD RGLTAVNVQL
NCKCGLKLRK QADWDAALRG VRLDGLPVYV TPGSCGLGTL SMFLNTCKAA GVKTADLKGG
VLYDPVGKAV MKGSLCGGKG ICAYYDQMAV MTKWAVANAP GFQTIGVSGL PYADSGASAF
EEVGAMLSTA VAYLRAMEER GLSVDETAAH MRFTVSIGAN LFLEIAKIRA LRELWAIIVK
ECGGSEEAAK IKLHARTSFW TLSKVDPWVN LLRGSAQAFS AIMGGVDSID VLPFDAAVRM
PDEFSRRIAR NCPLILLGEC NLDKVVDPAG GSWYLENLTD EASRKIWEFF QGIEKEGGIV
KALKAGSIQK KVNATAARRY ELADQRRQSI VGVNQYVNLA EKKLEVPEGS CCSAHKGHGC
CKNADIQLPV VEMSVDSACK AAEEGFSTCL INKALVAGAD CKCGEPLEME ALPKRRLAER
FESLLAKADA WVAEKGSRPM VFFANMGPLR QHKARADFSR DFLRAGGLDV VYPAGFQTPE
DAARAAAESG CAVCVICSTD DTYPEIVPAF CKALRETRPD MMVALAGYPA DYVEAFKEAG
VDIFIHVKAN CYNTVEAIQN KIGL
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