| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1961 |
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| Symbol | |
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| ID | 6275014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2377647 |
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| End bp | 2381408 |
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| Gene Length | 3762 bp |
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| Protein Length | 1253 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614022 |
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| Product | methionine synthase |
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| Protein accession | YP_001878555 |
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| Protein GI | 187736443 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain
[COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.23883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.00552664 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGCAGAG CATCCAGAAC AGAACGCCTT GATTACCTGA AAGACCAGTT ACGTAAAAGG
GTTGTCATCC TGGATGGCGC CATGGGCACC AATATCCAAA AATTCAGGCT GGGAGAGGGA
GATTACCGCG GAGAACGTTT TGCGGATGCG GAATGCTATC CCAACGATTT AAAGAATAAT
AACGACCTTC TGGTTCTGAC CAGGCCGGAT ATCATTCTTG ATATTCACCG CCGCTTTCTT
GACACGGGAC GGACGGATAT TCTGGAAACC TGCACATTCG GAGCTACCAG CATCGGCCAG
CATGATTATT TCTGGCACCG TCCGGAGGAA GGCAGCCACA AGGACCAGCA GTATTTCCAG
GAAGTGGTGG ACGCCCCCGA ATTGAAGGCC CTTGTCCGGG AATTGAATTT GGCGGCAGCC
GCACTGGCCC GGCAGGCATG CGACGAAGCG GAAGCTGCAG ACGGCAAGCC CCGCCTGGTG
GCCGGGTCCA TCGGCCCCAT GCCCGTCACC TGTTCCCTGT CCCCCGACGT GAATGATCCC
GGTTTCCGCG CCGTGAATTT CCGCCAGCTC AGGCAGGCGT ACCGGGATCA GGTGCTGGCC
CTGCTGGAAG GGGGGGTGGA CATGCTGCTG GTGGAGACGA TTTTCGACAC GCTGAACGCC
AAGGCAGCCC TGTTCGCCAT TGAAGAAATT TTTGAGGAAC AACCGGAAAG CTCTGTTCCG
GTCATGGTAT CCGTAACGCT GACGGACAAA GCCGGACGCA CGCTGTCCGG CCAGACGATT
GAAGCATTCT GGAACTCCAT CCGCCACGTT CGCCCCTTCT CCGTAGGCAT CAATTGCGCC
CTGGGGCCGG ACCTGATGCG CCCCTTTGCG GAAGAACTGT CCGGACTGGC AGATTGCCAC
ATGTCCATTT ATGCGAATGC CGGGCTTCCC AACCCGCTCA GCCCTACCGG CTACGACCTT
CTGCCGGCGG ATATGGCCCG GTTCATGAAG GAATACGCGG AACAGGGCCT GCTGAACATC
GTGGGCGGCT GCTGCGGAAC CACTCCGGAG CATATCGGCG CCATTGCGGC TGCCGTGGAA
GGAATGCCTC CGCGCGTTCC GGCTCCCCAA ACGCCCGCGC TTCGCCTGTC CGGATATGAA
GCGTACAACC ATACGCGGGA AAAAAACACC CTCTTTGTCG GGGAACGCTG CAATGTGGCG
GGTTCCCCCA AATTCGCCCG CCTGATTCGT GAAGGAAATT ACGAGGAAGC GGTATCCATT
GCCCGGCAGC AGGTGGAAAA CGGCGCGCTG GTATTGGATT TCTGTTTTGA CGACGGCCTG
ATCGACGGGC CGCAGGCCAT GGTCCGCTTC CTGAACCTTG TTTCCGCAGA GCCGGATATC
GCCCGCGTTC CTTTCATGGT GGATTCCTCC AAGTGGGAGG TGCTGGAAGC GGGGCTCCAA
TGCATGCAGG GCAAGGGAAT CGTGAATTCC ATTTCTCTGA AGGAGGGGGA AGAAGAATTC
CTGAAGAAAG CGGCGCTGAT TAAAAAGTAC GGCGCAGCGG TCGTGGTCAT GGCGTTTGAC
GAACAGGGAC AGGCCGCCAA TTACGAGGAC CGCGTCCGCA TCTCCAGACG GGCCTATGAC
TTGCTGGTAA ACCGGGTGCA GTTTCCTCCG GAAGACATCA TTTTTGACCC GAACGTCCTG
ACCGTAGGCA CCGGCATTGC GGAACACGCC GATTACGCTC TTGATTTCTT CAAGGCCGCA
GGCTGGATCT CCCGGAACCT GCCGCATGCC CACATTTCCG GCGGCATTTC CAATGTCTCC
TTTGCTTTCC GCGGCAACAA CCCGGTGCGG GAAGCCATGC ATTCCGCTTT CCTGTACCAC
GCTACGCAGC AGGGGCTGGA CATGTGCATC GTGAATGCCG GGATGCTGGA GGTGTACGAC
AATATTCCCA AGGACAGGCT GGAGCTGATT GAAGACGTTC TGCTGAACCG GAGGACGGAC
GCCACGGAAC GCCTGACGGA TTACGCGGAA AAACTGGCTG CGGAAAAAAC CGGAGACGGA
AAGGAGAAAA AAACCGTACA GGCCTGGAGG GAGCAGGACG TTGCCAAACG TCTGGAATAT
TCTCTTATCA AGGGCATTAC CGAATTTGTT GACGCGGATA CGGAGGAGGC TTTTCAGGAG
CTGGGGTCTC CGCTGAACGT GATTGAAGGC CCTCTGATGG CCGGCATGAA GGTCGTCGGG
CAACTGTTCG GGGACGGCAA AATGTTCCTG CCGCAGGTGG TGAAAAGCGC CCGCGTCATG
AAACAGGCTG TAGCCTGGCT CACCCCCTAT ATAGAAGCGG ACAGCAAAGG AGCCGCCAAG
GCGGGAAAAG CCGTGATCGC CACCGTGAAG GGGGACGTGC ATGACATCGG CAAAAATATC
GTCGGCGTGG TGTTGAGCTG CAATGGTTTT GAAATGATTG ACCTGGGCGT CATGGTCCAT
TGCGATACCA TTCTGGACCG GGCGGAAGCG GAACAGGCGG ACCTGGTGAT GCTTTCCGGG
CTGATCACCC CTTCCCTGGA AGAGATGTCC CATGTAGCCG CGGAGATGGA ACGCCGGGGG
ATGACCATTC CCCTGATGGT GGGGGGAGCT ACGACGTCAG CCCTGCATAC GGCCCTGAAA
ATAGCCCCCC ATTATCAAGG AGCCGTGGTG CATACGGAGG ATGCCTCCCA GGTGGTTCCC
GCAGCCGCCT CCCTGGTGGG AGAAAAAAAG GATTCCTACA TTGCCGCCGT GAAGGCCCGG
CAGGAGGAAT TGCGCAACAA TCATGAAAAC AAACCCGTCC GGGACCTCCT GCCCCTGGAG
AAAGCCAGGG AATTGCGCTG GAAGGGAGCG GAAGGCGGCT ATCTCCCCCC CGTTCCCGCC
CGTCTTGGCC CGGTTTCCAT CGGCAGCCTG CACAGCTCCG TAAGCTGCGG CTGCTGCAGT
GACGATCCAC GTTATTACGT AACTGTTCAG GAGCTTATCG AGCGCATGGA CTGGACGCCT
TTTTTCCACG CCTGGGAGCT GCACGGCACA TGGGACCGCG CCCGCCGGGA GTTCCGCACC
AAAGACCCGT CCAAGGCTGA GGCGGCCGCG GCGCTGTACC AGGACGCCCT CCGCTTGCTG
GAACAGGCCG TGAAGGAAAA CCGCTACCAG GCGCGCGGCG TCATAGGCAT TTTCCCGGCC
AATTCAACAG CCAGCCATGA CGACATCACC GTCTGGGCTG ATGAATCCAG AACCATTCCC
CTGGCTACGC TGCTGACGCA GCGCCAGCAA CTGGACAAAC AGGGGAAACC CCGGCTGGCG
CTGGCGGACT TCATCGCTCC CGAAGGCGTC AGGGATTACG TGGGGGCCAT GGCGGTCAGC
ATCCACGGCT CCCGCCGCTG GGCAAAGGAA TGGGAAGCCA GAAACGACTC CTACCGCGCC
CTGCTGGTCA GCTCTCTGGC GGACCGCCTG GTGGAGGCTT TCGCGGCCAT CGCCCATGAC
AAGCTGCGCC TTTTGTGGAA TATTCCGGAA GGGTCCGGCG TGCGACCTGC CTGCGGGTAC
CCCAGCCAGC CGGACCACCA GGAAAAGGAA ACCGTCTTCA CCCTGCTCCA CGCCCGGGAG
GAAGCGGGCA TGAGCCTGAC GGAAACATGG ATGATGCAGC CCGTTTCTTC CGTCTGCGCC
CTCGTCTTCT CCCATCCGGA AAGCACTTAT TTCTCCGTGG GCGTCACCGG GGAAGACCAG
CAGGAGGATT ACGCCTCCAG AAAACGGGCC TCCCGGCCCT GA
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| Protein sequence | MSRASRTERL DYLKDQLRKR VVILDGAMGT NIQKFRLGEG DYRGERFADA ECYPNDLKNN
NDLLVLTRPD IILDIHRRFL DTGRTDILET CTFGATSIGQ HDYFWHRPEE GSHKDQQYFQ
EVVDAPELKA LVRELNLAAA ALARQACDEA EAADGKPRLV AGSIGPMPVT CSLSPDVNDP
GFRAVNFRQL RQAYRDQVLA LLEGGVDMLL VETIFDTLNA KAALFAIEEI FEEQPESSVP
VMVSVTLTDK AGRTLSGQTI EAFWNSIRHV RPFSVGINCA LGPDLMRPFA EELSGLADCH
MSIYANAGLP NPLSPTGYDL LPADMARFMK EYAEQGLLNI VGGCCGTTPE HIGAIAAAVE
GMPPRVPAPQ TPALRLSGYE AYNHTREKNT LFVGERCNVA GSPKFARLIR EGNYEEAVSI
ARQQVENGAL VLDFCFDDGL IDGPQAMVRF LNLVSAEPDI ARVPFMVDSS KWEVLEAGLQ
CMQGKGIVNS ISLKEGEEEF LKKAALIKKY GAAVVVMAFD EQGQAANYED RVRISRRAYD
LLVNRVQFPP EDIIFDPNVL TVGTGIAEHA DYALDFFKAA GWISRNLPHA HISGGISNVS
FAFRGNNPVR EAMHSAFLYH ATQQGLDMCI VNAGMLEVYD NIPKDRLELI EDVLLNRRTD
ATERLTDYAE KLAAEKTGDG KEKKTVQAWR EQDVAKRLEY SLIKGITEFV DADTEEAFQE
LGSPLNVIEG PLMAGMKVVG QLFGDGKMFL PQVVKSARVM KQAVAWLTPY IEADSKGAAK
AGKAVIATVK GDVHDIGKNI VGVVLSCNGF EMIDLGVMVH CDTILDRAEA EQADLVMLSG
LITPSLEEMS HVAAEMERRG MTIPLMVGGA TTSALHTALK IAPHYQGAVV HTEDASQVVP
AAASLVGEKK DSYIAAVKAR QEELRNNHEN KPVRDLLPLE KARELRWKGA EGGYLPPVPA
RLGPVSIGSL HSSVSCGCCS DDPRYYVTVQ ELIERMDWTP FFHAWELHGT WDRARREFRT
KDPSKAEAAA ALYQDALRLL EQAVKENRYQ ARGVIGIFPA NSTASHDDIT VWADESRTIP
LATLLTQRQQ LDKQGKPRLA LADFIAPEGV RDYVGAMAVS IHGSRRWAKE WEARNDSYRA
LLVSSLADRL VEAFAAIAHD KLRLLWNIPE GSGVRPACGY PSQPDHQEKE TVFTLLHARE
EAGMSLTETW MMQPVSSVCA LVFSHPESTY FSVGVTGEDQ QEDYASRKRA SRP
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