| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1960 |
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| Symbol | |
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| ID | 6275015 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2376040 |
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| End bp | 2376654 |
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| Gene Length | 615 bp |
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| Protein Length | 204 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642614021 |
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| Product | PA14 domain protein |
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| Protein accession | YP_001878554 |
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| Protein GI | 187736442 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.372065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.00673603 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGAACATTA TTCTACCCAT CCTGAGCTTT CTGTGCGGTG TCATGCTGAC GGAAACAGCT
TCCGGCTCTT CTGAGGAGGG AAAGCCTTCT CCCGGCGTAG TGCAGGAATT GTGGTTCGGC
ATTCCGGGGG CATCCGTAAA GGACCTGACC CACAGGAAGA TTTTTGAAAC GGCGGCCCCG
GATGTCCGCA CGATCAGCCA TCTGGATGTG GAAAACCAGG GAGACAGGTA CGGAGCCCGT
TACTCCGCCC TGCTGAAAGT CCCGGCAAGC GGGAAGTACC GCCTTTACCT GTCTTCCGAC
GATTCCGCAG AGTTATGGCT GGGCAAGGAT GCCACCCAGA AGGACATGGC CTGCATCGCC
ACCGTCAAAG GATATTCCGA CATCCATAAT TGGGGCAACC AGCCCAACCA GGCTTCCGAA
CCTGTCCAGC TGGAAGCTGA CCGGTTTTAT TTTCTTCAGG TGATTCACAA GGAGGATGGA
GGCCCGGACC ATATGTCCGT CGCCTGGTCC GGGCCGGGCA TCCCCGCCCC TGTCATCATT
CCTGCCACGG CGCTGTTCAT ACCGCCCGGT ATCTTGCCGG AAGAAAAAAA ACAATCCCCA
GCCAAAGCGG ACTGA
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| Protein sequence | MNIILPILSF LCGVMLTETA SGSSEEGKPS PGVVQELWFG IPGASVKDLT HRKIFETAAP
DVRTISHLDV ENQGDRYGAR YSALLKVPAS GKYRLYLSSD DSAELWLGKD ATQKDMACIA
TVKGYSDIHN WGNQPNQASE PVQLEADRFY FLQVIHKEDG GPDHMSVAWS GPGIPAPVII
PATALFIPPG ILPEEKKQSP AKAD
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