| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1957 |
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| Symbol | |
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| ID | 6275053 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2372975 |
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| End bp | 2374396 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642614017 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001878551 |
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| Protein GI | 187736439 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2364] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.217761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.00755155 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGATT ATCGTGTCCG GAGAAGCCTT GGAGAACATG TCCTGCGCTG CTCCGTCCTG
ATTGCTGCGC TCTTCATCAT GTCTCTGGGC ATCGCTCTGT CCACCAAGGC AGACCTGGGA
GTCTCCCCCA TCTCCTGCAC GCCCTATGTG CTCAGCCTGG CATTCCCTCT AACCATGGGG
ACCGTCACCA TCCTCATGCA CCTGAGCTTT GTGGCCGTGC AGGCGGCCCT GCTGAAAAGG
CAATTCCGTC CGGCGCATCT GCTCCAGATT CCCATAGCTT TTATCTTCGG CTTTCTGACG
GATTTTTCCA TGTGGATCAT AGCGCCTCTG GAACCGGACG GATACCTGTG GTCCGTTATT
CTCTGCCTGT TCAGCTGCGT GGTAATCGGA TTCGGCGTCT TTCTTCAGGT TAAGGCGGAT
TCCGTTCTTC TGGCAGGGGA AGGCATGAGC CTGGCCTTCG TCAAACTCTT CAAATGGGAA
TTCGGAGCCG TAAAAACCGG GATGGACTGC ACGCTCGTCT GCATCGGCCT GGCCTGTTCC
CTCATCTTCC TGCCCGGACT GACAGGCATA CGGGAAGGAA CCGTGGTGGC CGCCGTCCTG
GTGGGAATGA TCGTCCGTTT TTTCAACAGG CACGTCTTCT GGCCGGACAG GCTCCTGGAA
CGGCTGGCGC GCCCCGGAGC AGCAAGCGAG CTTCCTCCGC TGGCACAAAC GGCCGCTTAT
GCTCCGGACG CCCCTCTGGT CATTTCCATT GACCGGGAAT ACGGTTCCGG CGGCCATGCC
ATCGGGAAAA TGCTGGCGGA AAAGCTGGGC ATCCGATTCT ACGACTCGGA ACTGGTGTAC
CTCACAGCCT CCCGGAGCGG CCTCACTCCG GACTACATCC GCAAGCACGA ACAACAGCTT
TCCAGCCGCT TCCTGCACGA ACTTTACGCC CAGAACTATG CCTACACGGC GGAGGAAATG
CCCCCTGAAG ACGCCACCTT CCTGGCACAG AGCAAAGTCA TCCGGGACAT TACGGCCAGT
CAGGCATGCG TCATCGTGGG CCGCTGCGCC AACTTCATCC TGAAAGGGAG ACCCAACCTG
TTCAGTGTTT TCCTTCATGC GGACCGGGCC ACGCGCATGC AGCGCGTTAT TGAAAACTAT
GGGGTAGAAC CTGGCGGGGC AGCCCGGGCC ATGGACATCA TGGACTCCCG CCGCCGCACC
CACTGCCTGC ACTACACCGG GCAGGAACTG GGCAATGCAC GCCTCTACGA CTTGTGCGTC
AACACGTCCG ATTACGGACT GAAACGCACG GTGGAACTGA TTCTGGAAGC CATCAATACC
AGAACCGAAC AATCTTCCGC TGTAGAAACG GTTCCCGTCC GCTCCGCATC TTTTCCCGAA
CCGGAAGAGG ACAGCATTCC CGGAGAAATA TCCCTCGCCT GA
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| Protein sequence | MEDYRVRRSL GEHVLRCSVL IAALFIMSLG IALSTKADLG VSPISCTPYV LSLAFPLTMG
TVTILMHLSF VAVQAALLKR QFRPAHLLQI PIAFIFGFLT DFSMWIIAPL EPDGYLWSVI
LCLFSCVVIG FGVFLQVKAD SVLLAGEGMS LAFVKLFKWE FGAVKTGMDC TLVCIGLACS
LIFLPGLTGI REGTVVAAVL VGMIVRFFNR HVFWPDRLLE RLARPGAASE LPPLAQTAAY
APDAPLVISI DREYGSGGHA IGKMLAEKLG IRFYDSELVY LTASRSGLTP DYIRKHEQQL
SSRFLHELYA QNYAYTAEEM PPEDATFLAQ SKVIRDITAS QACVIVGRCA NFILKGRPNL
FSVFLHADRA TRMQRVIENY GVEPGGAARA MDIMDSRRRT HCLHYTGQEL GNARLYDLCV
NTSDYGLKRT VELILEAINT RTEQSSAVET VPVRSASFPE PEEDSIPGEI SLA
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