| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1943 |
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| Symbol | |
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| ID | 6275168 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2358729 |
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| End bp | 2361482 |
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| Gene Length | 2754 bp |
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| Protein Length | 917 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642614003 |
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| Product | Tetratricopeptide TPR_2 repeat protein |
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| Protein accession | YP_001878537 |
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| Protein GI | 187736425 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG1196] Chromosome segregation ATPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 0.0509436 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACTC CTCTCCCCCT TGGCATTACC CTTGCTTTGT CCCTGACCTG CGGCTCCATG
CCCCTTCTGG CCCAGGGGTC GTATATGCCC GGCCCCATGC CCGCCACCGC CGGGACAAAG
CAGGATCCAA CGGACATGTA CCTGGAGGCG TTGAGGCTGG TGACCCAAGC CGCAGGACTG
GTGGAAAAAC GGGATTATAT AGGAGCCATC CGCCTGACAC AGCAGGCGGA AGACAAGTTC
GGACGCCTGG CTAAGTCTTA TCCCCAATGG CGCCCCAACC TGCTGCAAAC GCGCCGCCAG
CTCAACAGGG AAAATCTGGA CCAGTGGCAG AAGCTGGCCC AGCAGCAGGC CGCCGCCTCT
TCTTCATCCG GCCTGGAGCT GGAACGCCCG GCCTCCGTGC CGAAGCGCCC CAGGCCAAAA
CCCAACATAG CCCTCCCTCC CGGCTACAAG GGCGTGGAAT TCCCTACCCG TCCCGGAGAA
TCCCTGATCA ATACCATCCC GTCCCCTTCC GTTTCTCCCG GGGCGGCTCC GGAAGTGGTG
GAGAGCAATT ACGAACGCAT CCGCAGACTG CTGGATAAAA CCACCATGGA GAACAATGCT
CTGATCCAGG CTCTCAAGCG CACCCGCCGG GAGCAGGAGG AGATTCTGGC AAAACTGGCC
GTGGCATCCG CCGGAGAATC CGTTTACCGA GATGAATTGC TCAAGGTCAA AAAGCAGATG
GAGGATGAAA GAAAGACCAG CAACAAGCTT ATTCAGACTC TCACCAGGAG AGTGGAGGAA
CTGGAACAAA ATGTCACCTC CCTCAGCCAG GACAAAGCCC GTTATCTGGC GCAGATCGCC
GATCTTCAGC TGCAGCTCAA GGAGTACCAG GACAAGCTGG ACAAAGTGAC GGATGAGAAA
AACGCCCTTC AGAAAGACCG GGACCAATTG GCGGCCCTGG TGGAGCTCAA CAGCCCGGAC
AAAACAAAAA ACCTGTTGGA CCGCAACCTG ACGCTGGCGG CCCAGCTCAA GGATGCCCAG
GACAAAATCG CCGCTCTGGA AACAGCCAAA TCCGATTCCG AAGAACAGCG GAAAGCCAAC
CTGAAAGCGT TGGAAGAGGC GCGTGAGGAA TCCGCAGACC TGAAACAGAA ACTGATTGCC
ATCCGGGATG AAAACATCGG CTACCGCAAA CGCATCACAG AGTTGAATAC CAAGCTCATC
AATGCGGATG TGGAACTGTC CAAGCTGGAG GCCAATCCGG AAAAAAGCCC GCTTCTTCTG
GAAGAAAACC AGCTGCTGCG CTCCACCATC GCCAAGCAGC TCCGCATACT TTCCGTGCAG
GACCAGAGCC GCTCCCTGCT CATCAGCACT TATAAGCGGC TGCATCAGGA AAATCCGGAC
ACGGCGGAAA TAGCCTCCCT GATGGACAAT GAAGAAGCCA TCAAGCTCAC TCCTGCGGAA
AAACAAATTG TCAACGCCAT TGCCAGGGAT AACAATATCA ATGTTCCCCT GACGGATCAG
CAGAAGGAAA AAATCAACAA GCTGGCACAG GCCCTCTCTG CGGAACGCGG CAAGGCCGCC
CAGCTTGCTC GGGATTTGGA ACTGGCGCGC AGCCAGATGA AGACCAAAGC GGACAAATCC
GCCAGAAACG ACAAGAAACA GGCGGAAGCC CTGGCGCGGG CCCAGAAGGC CCTGGAACAG
AAAAACATTC AGGTGGAGGA ACTCACCCGG CAGATGGAAG AACTGAAAAG CCGTTCCGCC
GAACAGGCCC GCCTGGCCGC CATCTCCGCC GGAACCATTA CTCCGGACCA GGAAAAAGCG
CTGAACCGGA GCATGGAAGC CACGGTACGC CGGAAGCTGG AGGCGGAAGC CCTGGGGCAA
GGCGCCGCAG AAGCCTTCGC CAAAAAACGC TATGCCGCCG CAGAACAGCT GTACCGGACT
TTGCTGGACT TCCAGCCGGC TCACGTTCCG GCCCTGGTCA ATCTGGGGAC CATTCTGCTT
CAGCGCAACA AGGCGGAGGA AGCCATCAAA TTTCTGAAAA AAGCCACGGA ACTGGACGCC
TCCTCCTCCC CCGCATGGTT CATGATGGGG GTGGCCCAAT ACCGCGCCGG GGAAGACCAC
CACGCCATCG CCTCCCTGAC GGAAACGGTC AGGCTGGATC CGGCCAACGC TCCCGCCCTG
CTTTACCTGG GCAACCTGGA AACCAGCGCC GGGAACTATG AAAAAGCGGT GGCCCACTTT
GAAAACGCCC TGAAAATCCA GCCGGAATCA CCGGACGCGC ACTTCAACCT GGCCTGGACC
TATTCCCGGC TGGGCCGCAC GGCGCAGGCA CGCAAAAGCT ATGATGCAGC CATCCGCTGC
GGAGGCTTGC CGGATTCCGA CCTGGAGCTT GCCATTACCG GAACCACCAC CCTTCCCCGC
AAAAAACAGG CTGCGGACCA GAATCCCGCC TCCGCCGCAA AAGAGGACGG CCCCCAGCTG
GCCGCGGCAA TAAGCGATCC GTCTGCCATT CCCCACGACG CCAATGAAGT GCCTGCTCAT
GTGGCGGAGG ATCCGAATGC GCAGGAAAAG CCGTCCGCCG GTCCCAAACA GGTCGTCGTC
AGCCACCGTC CGGAAACCGA ACCCATCTCT CTGGCAGCCC AAATGAGGGA AACTGCCCCT
GCGGCGGCAT CCGCACAACC TCCGGCAGAA GCCGCAACTG CCGCAACGGA AACGCCCAAG
CCGGAAAAGC AGGAACCTCC GCGCAGGAAA AGCCGTTTCC GAATCGGTTC CTGA
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| Protein sequence | MMTPLPLGIT LALSLTCGSM PLLAQGSYMP GPMPATAGTK QDPTDMYLEA LRLVTQAAGL
VEKRDYIGAI RLTQQAEDKF GRLAKSYPQW RPNLLQTRRQ LNRENLDQWQ KLAQQQAAAS
SSSGLELERP ASVPKRPRPK PNIALPPGYK GVEFPTRPGE SLINTIPSPS VSPGAAPEVV
ESNYERIRRL LDKTTMENNA LIQALKRTRR EQEEILAKLA VASAGESVYR DELLKVKKQM
EDERKTSNKL IQTLTRRVEE LEQNVTSLSQ DKARYLAQIA DLQLQLKEYQ DKLDKVTDEK
NALQKDRDQL AALVELNSPD KTKNLLDRNL TLAAQLKDAQ DKIAALETAK SDSEEQRKAN
LKALEEAREE SADLKQKLIA IRDENIGYRK RITELNTKLI NADVELSKLE ANPEKSPLLL
EENQLLRSTI AKQLRILSVQ DQSRSLLIST YKRLHQENPD TAEIASLMDN EEAIKLTPAE
KQIVNAIARD NNINVPLTDQ QKEKINKLAQ ALSAERGKAA QLARDLELAR SQMKTKADKS
ARNDKKQAEA LARAQKALEQ KNIQVEELTR QMEELKSRSA EQARLAAISA GTITPDQEKA
LNRSMEATVR RKLEAEALGQ GAAEAFAKKR YAAAEQLYRT LLDFQPAHVP ALVNLGTILL
QRNKAEEAIK FLKKATELDA SSSPAWFMMG VAQYRAGEDH HAIASLTETV RLDPANAPAL
LYLGNLETSA GNYEKAVAHF ENALKIQPES PDAHFNLAWT YSRLGRTAQA RKSYDAAIRC
GGLPDSDLEL AITGTTTLPR KKQAADQNPA SAAKEDGPQL AAAISDPSAI PHDANEVPAH
VAEDPNAQEK PSAGPKQVVV SHRPETEPIS LAAQMRETAP AAASAQPPAE AATAATETPK
PEKQEPPRRK SRFRIGS
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