| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1939 |
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| Symbol | |
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| ID | 6275186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2353856 |
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| End bp | 2354968 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613999 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001878533 |
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| Protein GI | 187736421 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.128072 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CCCCTCAAAA AAAGGGAACG TCCTGGTCCA TAGGCATCGG CCTGGGGATT
GTGGCGCTTC TGATAGGCAC GGCTATTGTA ACGGAGCCGT CCGTCTCTTT TTCCTCTTCC
GGAAACAGGG GCTGCGCGCC CGCAGGAACG GAGACACCCC TCCGGCTGCA GACGAACACT
CTTTCCATTT CCGCGCCCGG CATCGTAAAG GCCTCCTACC TGACGATGCT TTCTCCCAGC
GTTTCCGGAA AGGTGGACAA AGTGCATCCC CTGTTTAATG TGGGGGAAAT TGTCCTGAAG
GGAACCCCCC TGATGGAATT GGAAAAATTT GAATACCGCG CCCGACTGGC GAACGCTCAG
GCGGAACTGG AACAGGCCCG CCTGGATGTT TCTACGGAGC AGGCGGAAGC CCTGAAAGCC
ATCAAAAAGA CATACAGCTC CGTCTCCAAA AGCGGAAAGG AATCCGAACT GGTGCTCCGG
GTTCCGCAGC GCAGAGCCGT AAACGCCAGG CTGAACGCCG CGGAGGCGTA TGTGGCGGAA
GCAGAACAGG CCCTCCGGGA TACGGTGCTG GAAGCTCCCT ATACCTGCCA GGTGGTGGAA
TGCTCTGTGG GAGCCGGTGC CCGCGTGGTC GCCGGGCAGC CGGTGGGGAA AGTAATTCCT
CTTCAGGAGC GGATGATACG GATTCCCGTT CCGCTGGAAG AATTTTCCGC ATTGCCCAGG
GATGAGCAGG GCAAGGTGAA TACGGCTCTG ACCGCCTCTT GCGTGCTGAA TAATGGAAAA
CGGCTGCAGT GGTTGGGCCG CGTTACGGCG GTGGATGCGG CGCTGGATTC CAAAAGCAAT
TCCGCCGTGT TGATTGCCTC CCTGGAGCCG AATGCCTCCC ATGTTTCCGA GTGGCAAGTG
GCTCCCGTCA ACATGGCTCT TCAAGTAGCC ATCAATGTTC AAGTTCCCGT TTCCGCGTGG
ATTCCCGCTT CCGCCGTCAG GGACGGCAGC TCCATCCAGG TAAAAACGCC GTCAGGAATG
CAGGAACGCA AGGTGCAGGT AGTGGCGTTA AAAGACGGCA GAGCCCTGGT GACCGTTCCG
GAATTCCAGG CAGGGGACGC TCTGATTCTT TAA
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| Protein sequence | MSEAPQKKGT SWSIGIGLGI VALLIGTAIV TEPSVSFSSS GNRGCAPAGT ETPLRLQTNT
LSISAPGIVK ASYLTMLSPS VSGKVDKVHP LFNVGEIVLK GTPLMELEKF EYRARLANAQ
AELEQARLDV STEQAEALKA IKKTYSSVSK SGKESELVLR VPQRRAVNAR LNAAEAYVAE
AEQALRDTVL EAPYTCQVVE CSVGAGARVV AGQPVGKVIP LQERMIRIPV PLEEFSALPR
DEQGKVNTAL TASCVLNNGK RLQWLGRVTA VDAALDSKSN SAVLIASLEP NASHVSEWQV
APVNMALQVA INVQVPVSAW IPASAVRDGS SIQVKTPSGM QERKVQVVAL KDGRALVTVP
EFQAGDALIL
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