| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1933 |
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| Symbol | |
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| ID | 6275249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2345449 |
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| End bp | 2346867 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613993 |
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| Product | protein of unknown function DUF1111 |
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| Protein accession | YP_001878527 |
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| Protein GI | 187736415 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG3488] Predicted thiol oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.242314 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.0976167 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGCTT CATGCGTGAG CTGCCATGTA AACCGCGGCC GTGATTTCAC GCCCCCCGTC
CTCAGGACGA AAGAAGGCGA GCCCGGGCCG GCTTACTATC TGGGCGGTGA AAAGGGAACG
GTGTTTAATG CCACCAGTAA AGCGTTTGAG CAGGAATCGC CGGCAATTAC TGAAGCCGGC
CTGACGAATC GTTTCAAGGC GGGCGAAATT ATTTTTGAAG GGAACTTCGT ACCCGTGAAG
CGCAATCGCT TCGGCGGTCT CGGCCCCACT TACATTAAGT CATCCTGTCT GGCCTGCCAC
CCCGGTTATG GCCGCGGACA GCGCACCGGC AATTTTGACA GGCAGTACGG CAACGGTTAT
CTGGCCTTTG TACATAATCC CGATGGCACC CCAGTTAAGG GGTACACGGG CATGCTGCAG
ACGAAAGCGG TTCCTCCTTT TGTGCCTTAT GCCAAGGGGG TGAAAATAGA ATGGCATGAT
TTTGTTGACC AGTACGGAAA CAAATACCCG GACGGAACGC CCTACAATGC GGGCAAGCCG
ACGGAAGGCA CGTTGACTTA TCCCACGGCA GATGTGATTG AGCCGTTGCT TCCGCTTCCG
GCCGATTACC GCGTGTCAAT CGAATCAACA ATCGGCATTT ACGGAACGGG GCTGCTTGAT
GCCATCCGTG ACGAGGATAT TATTGCCGAA TACAGGCGCC AGCAGAGCAT GACAGGCCCG
GTGAAGGGGA TTCCTGGCAA ATGGATTGAC GAGCCCGACG GTACCCGGCG CCTCGGAAAG
TTCACGTGGG ACTGCTCGCG CGCCACACTG GAAAACGGTC CTGGCGCCAA TGCGCTTTGG
AACGTGACGA ATGTAACGCG CAAGAACCGT CCGAACATCT ACATGACGCC CGAATGGCTC
GAAAAACAGA AGGAACTTGG CATTGATGTA AGCGGTCTTG AAGGCCCGCA GGAAGAGGAA
CTCTCAATGC AGCAGTATGA AGATTTCATG GTCTGGCATC GCGGGCTAGC CGTGCCTGCC
GCCCGCAACC TGGACAAGCC TGACGTGCGC CGCGGACAGG AACTCTTCAA TAAACTGGGG
TGTGCCGGTT GCCACAAGCC TGAATGGACA ACGGGGGAAT ATAAGCCGCT TCCCGGTTAT
GCAAACCAGA CCATCCGCCC CTATACGGAT ATGCTGCGTC ACGATATGGG GGAAATCAAC
CGCGGACGTT CTCGTTTCTG GCGTACGCCG CCCCTCTGGG GAAGGGGGCT GATGCACAAA
ACCGCCAATC ATACAGATAT GTTCCATGAC CTGCGCGCCC GCGACTTTGA AGAGGCTATC
CTGTGGCATT TCGGTGAAAG CGAATTCTCC CGTGAAATGT TCCGCCATCT CTCCGCCGAA
GAGCGCGGCC AACTGATTCA ATTCCTGAAA GCACTTTAA
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| Protein sequence | MTASCVSCHV NRGRDFTPPV LRTKEGEPGP AYYLGGEKGT VFNATSKAFE QESPAITEAG
LTNRFKAGEI IFEGNFVPVK RNRFGGLGPT YIKSSCLACH PGYGRGQRTG NFDRQYGNGY
LAFVHNPDGT PVKGYTGMLQ TKAVPPFVPY AKGVKIEWHD FVDQYGNKYP DGTPYNAGKP
TEGTLTYPTA DVIEPLLPLP ADYRVSIEST IGIYGTGLLD AIRDEDIIAE YRRQQSMTGP
VKGIPGKWID EPDGTRRLGK FTWDCSRATL ENGPGANALW NVTNVTRKNR PNIYMTPEWL
EKQKELGIDV SGLEGPQEEE LSMQQYEDFM VWHRGLAVPA ARNLDKPDVR RGQELFNKLG
CAGCHKPEWT TGEYKPLPGY ANQTIRPYTD MLRHDMGEIN RGRSRFWRTP PLWGRGLMHK
TANHTDMFHD LRARDFEEAI LWHFGESEFS REMFRHLSAE ERGQLIQFLK AL
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