Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1932 |
Symbol | |
ID | 6275260 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2344345 |
End bp | 2345433 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 642613992 |
Product | Endoribonuclease L-PSP |
Protein accession | YP_001878526 |
Protein GI | 187736414 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.375658 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.0845217 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGCA ACTTGGAAAA AAACAAAGGT GTTTCCGTCA AGTCGCTCCC GCTGGGCGGC GAAGGCGCAT CTCTGCAATT CGTTACGCTT GCCGGAAGCG AACCTGGGCA GTTGGCCGAG CATGCCGAAT TACTCCAAAA AGCTGAAAAA AGCGGTTTTC GGTGGATTGG CCCGGAAGTG TACGGCAGCG CTGATCTGGA TCTCTCCCCG GTGCCCGGGG CGGGGATGAC TGCCTTTTTG GGTACGAAAA CGGGCGCATC CTTCTATCGA GGCATGCAAA TTTGCGCGGT GGAGGGGATA AATGCCCGGG CGATTGAGTT TAATGGCCGC ACCGCCGGGG TTTTTTATGA GGATGAATAT GCCGAGTATG CCGTTTTGGG CGGTTTGTCG CCCCGCGACC GGACAGCCGG ACGGACTGAG CAGACATTGG ATGTATTCCG GCAGATGGAA GAAGCGCTGA ACCGGGCCGG CATGGATTTT TCCCACGTGG TCCGCACATG GTTTTACAAC AACCGCCTGC TGGACTGGTA TGAAGAGTTC AACCGCGCCC GCGACACATT TTTTGAAAGC CGCGGCGTGT TTGATCGTCT GGTTCCGGCC AGTACGGGGA TTGGTTCCGG CAATCGGGAA CATGCGGCCT TGTCGGCCCG CGTATTTGCC ATTCGGCCTA AGGGCGACCG TGTGACGGTA AAAGATATCC CTTCGCCTCT GCAATGTTCA GCTCAGGATT ACCGCAGCTC ATTCAGCCGT GCGATAGAAG TGGACCACCC TCTCTTCCGG CAAGTCATCG TCTCCGGCAC GGCCAGCATT GCCCCTGGCG GCGAATCCGT ACATCTCGGC GATATCGACA AACAAACAGA GCTCTCGCTG GACGTGATTG AAGCCATCCT GAAATCACGC GGCATGGGCT GGAAGGATGT CGTCCGCTCC GTAGCCTATT TCAAAGACAA GGATTATGCC CCTCACTACG AAAAAATAGC TCTGCGCCGC GGCCTCGCCA TCATGCCCTG CATCGGCATA CAGGCCGATG TGTGCCGGGA CAATCTGTTG TTTGAAATGG AACTTGATGC AGCCGTGTTG AAAGCCTGA
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Protein sequence | MTCNLEKNKG VSVKSLPLGG EGASLQFVTL AGSEPGQLAE HAELLQKAEK SGFRWIGPEV YGSADLDLSP VPGAGMTAFL GTKTGASFYR GMQICAVEGI NARAIEFNGR TAGVFYEDEY AEYAVLGGLS PRDRTAGRTE QTLDVFRQME EALNRAGMDF SHVVRTWFYN NRLLDWYEEF NRARDTFFES RGVFDRLVPA STGIGSGNRE HAALSARVFA IRPKGDRVTV KDIPSPLQCS AQDYRSSFSR AIEVDHPLFR QVIVSGTASI APGGESVHLG DIDKQTELSL DVIEAILKSR GMGWKDVVRS VAYFKDKDYA PHYEKIALRR GLAIMPCIGI QADVCRDNLL FEMELDAAVL KA
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