| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1918 |
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| Symbol | |
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| ID | 6275362 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2328690 |
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| End bp | 2330006 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642613978 |
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| Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
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| Protein accession | YP_001878512 |
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| Protein GI | 187736400 |
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| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase
[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.000565023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGCATGTG GAAACCAAAG AACTGTCGGC TCTCCGGCCT CCCTGGCCGG TACCTCTTTG
CATACGGGAC AGCCCGTTAC CCTGACCCTG AAGCCGGCTC CTGCCGACTT CGGCATTAAA
TTCCGCCGGG TGGACATTCC GGACCAGCCT TTCATCAGCG CGGACGTGGA AAAGGTGCAG
ACTGTGGAAC GCGCCACCAG CCTGGCTGAA GGTTCCGTCA AAGTGCATAC CGTGGAACAT
ATTCTCTCCG CCCTCACGGG CATGGGCATT GACAACGCCG TCATTGAAAT GGACGCCAAT
GAACCGCCCA TCGGGGACGG GTCCTCAGCC CCCTACGTAG AGCTGATCAA GAGCGCCGGC
ATCGTGGAAC TGGATGTGCC GCGCCGCTAT CTGGAAGTGC GCGAGGCCGT TACCATTGAA
ACCAAGGGCG GTTCCATCCT GACCATTCTC CCCTCCAAGC AATTCCGCGT TTCCGTCACC
TGCGTGGGGC CGGAAAACCG CATTACCCAG TACTTTGACT CGGTTATCAC GCCGGAAACG
TATGAAAAGG AACTGGCCCC GGCTCGCACT TTTACGTTCT ACGAAGACAT CAAGCCCCTG
CTGGAGAAGG GCCTCATCAA GGGCGGCAGC CTGGAAAACG CCGTGGTCAT CCGCGGCGAG
GAGCTCATGA GCAAGGAGCC CATGCGTTTC ATCAATGAAT TTGCCCGCCA CAAGGCCATG
GACCTTATTG GAGACCTGAC CCTGTGCGGC AAACCCATCC TGGGCCACGT CATCGCCATC
AAGCCGGGCC ACGGCCCGAA CACCGAACTT ACGGCCAAGC TCAAAAAGGA ACACCACCGC
AACCAGCAGA TGGCCCCCAA TCCCGTCAAT GTTCCATACG GAGACGCCGT GCTGGACATC
AACGAAGTGA TGAGCCTTCT GCCGCACCGC TATCCCTTCC TGATGGTGGA CCGCATTATC
GGTTTTGAAG GAGAAACCAA GTGCCGGGGA TTGAAGAACC TGACCATGAA TGAACTCTTT
TTCCAGGGCC ACTTCCCGGG ACATCCGGTC ATGCCGGGCG TTCTCCAGGT GGAAGCCATG
GCCCAGGTAG CCTCCATCGT CATGCTGCGC CAGCCCGGCA ATGCCAGCAA GCTCGGCTAC
TTCATGAGTG CGGACAAGGT TAAATTCCGC CGCGTCGTGG TTCCCGGCGA TACGCTCATC
ATTGAAGCGG AACTGACCAA GATGCGCGGA AACATCGGCC AGGCGACGGC TCGTTGTCTG
GTGAACGGCC AGGTGGTTTC GGAAGCCGAG CTTAAATTCG GCCTTCAGGA TGCTTGA
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| Protein sequence | MACGNQRTVG SPASLAGTSL HTGQPVTLTL KPAPADFGIK FRRVDIPDQP FISADVEKVQ
TVERATSLAE GSVKVHTVEH ILSALTGMGI DNAVIEMDAN EPPIGDGSSA PYVELIKSAG
IVELDVPRRY LEVREAVTIE TKGGSILTIL PSKQFRVSVT CVGPENRITQ YFDSVITPET
YEKELAPART FTFYEDIKPL LEKGLIKGGS LENAVVIRGE ELMSKEPMRF INEFARHKAM
DLIGDLTLCG KPILGHVIAI KPGHGPNTEL TAKLKKEHHR NQQMAPNPVN VPYGDAVLDI
NEVMSLLPHR YPFLMVDRII GFEGETKCRG LKNLTMNELF FQGHFPGHPV MPGVLQVEAM
AQVASIVMLR QPGNASKLGY FMSADKVKFR RVVVPGDTLI IEAELTKMRG NIGQATARCL
VNGQVVSEAE LKFGLQDA
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