| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1915 |
|---|
| Symbol | |
|---|
| ID | 6275372 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | - |
|---|
| Start bp | 2324114 |
|---|
| End bp | 2326675 |
|---|
| Gene Length | 2562 bp |
|---|
| Protein Length | 853 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 642613975 |
|---|
| Product | type I restriction-modification system, M subunit |
|---|
| Protein accession | YP_001878509 |
|---|
| Protein GI | 187736397 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.93858 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 0.00587021 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAC AACAGCTTGC ATCGAAGATT TGGGAGTCTG CCAACAAAAT GCGCTCCAAA
ATTGAAGCCA ATGAATACAA GGACTACATT CTCGGCTTCA TCTTCTACAA GTTCCTTTCC
GACAAGGAAG TCAAGTTCCT GAAAGAGAAC GACTGGACAG ACGATGATTT GCCCCATGTT
ACGGAAGATG ACGCGGAGAC GGTTGACTAT ATCCGCAGCA ATGTAGGTTA CTTCATCTCC
TATAAACACC TCTTTTCTAC ATGGATTGAC AAGGGCAGCG ACTTCAACGC CGCTGATGTG
ACGGAGGCTC TTTCTGCTTT CAGCCGCCTG ATCAATCCCT CTCACAAAAA GGTCTTTGAC
AAGGTGTTCG CCACCTTGGA AACAGGCCTC TCCAAACTTG GGGAAAACTC CGGTGCCCGC
ACCAAAGCCA TCCGCGACCT CTTGCATCTC ATCAAGGATA TCCCCATGGA TGGGCGGCAG
GATTATGATG TCCTGGGGTT TATCTACGAA TACCTCATCA GCAACTTTGC TGCAAACGCG
GGCAAGAAAG CGGGCGAATT CTACACCCCG CATGAGGTTT CGCTCCTCAT GTCGGAAATC
GTGGCTGCCC ACCTTAAAGA CAGGCAGCAA ATCAAGATTT ATGACCCCAC CAGCGGTTCA
GGCTCCCTGC TTATCAATAT CGGCAAGTGC GTGGCGCGTT ACATGGGCGG GGGAGACAAC
ATCAAATACT ACGCTCAGGA GCTTAAGGAA AACACCTACA ACCTGACCCG CATGAATCTG
GTAATGCGGG GGATTTTGCC GAACAATATC GTGACGCGCA ACGGCGACAC GCTGGAGGAA
GATTGGCCGT ATTTTGATGA TAACGACCCG GTTAACACCT ATGACCCGCT CTATGTAGAT
GCTGTTGTCT CCAACCCTCC CTATTCCCAA TCGTGGAATC CCGCAGACAA GGAAAGCGAC
CCGCGTTACC GCTTTGGGCT TGCCCCGAAA GGCAAGGCTG ACTATGCATT CCTGCTGCAT
GACCTATACC ACCTCAAGCC TGACGGCATC ATGACGATTG TACTGCCCCA TGGCGTCCTG
TTCCGTGGCG GTACGGAGGG GGCTATCCGC AGGAATCTGG TGGAATACAA CCATATTGAC
GCTATCATCG GCTTGCCTGC CAACATTTTC TTTGGCACCG GTATTCCCAC CATCATTATG
GTGCTCAAGC AGAAACGGGA AAATACGGAT GTGCTGATTG TGGATGCGTC CAAGGGCTTT
GCCAAGGTGG GCAAGAACAA TGTCCTCCGC GCGTGCGACA TCAAGAAGAT TGTGGATGTG
GTTTCTGCCC GCGCCGATGT GGAGAAGTTC GCCAAGGTGG TAAGCCTTGA TGAAATCCGG
GGCAATGACT ATAACCTCAA TATACCGCGC TATGTCGATT CCTCAGACAA AAACGAACGT
TGGGATATTT TCGCTACCAT GTTTGGCGGC ATCCCCTTGT CTGAACTGGC GGATTTTCAT
GAGTACTGGG CAGCATTCCC TCATCTGAAA GATGCTCTGT TCACCGCTTC CGGCGAGGCT
CATTGCCGCT TGAACGTGGC TAACCTCAAG TCGTCCGTTC TTGACGCCGC TGATGTTACG
GCATTTACCG CTCGCTACGC TTCCTCTTTT GCTGATTTTG AAGCATTCCT CACCACCCGA
TTGCTCGATG GTATGGAAAC GCTCAATATC ACCAGAGAAA AATCCATCAT CAGTGATGAT
GTTTTCTCTC GCCTGAACGG GCTTCCCCTG ATAGACAAAT ACAAAGCCTA CCAGTTGCTG
GATGATGAGT GGAAAAAGAT TGCCGTGGAC CTGGAGATTA TCAGGACTGA GGGCTTTGCT
TCTTCCAAAC AGGTTGACCC CAACATGGTC GTTAAAACCA AGGACGGCAA AAAGCAGGAG
GTGCAGGACG GCTGGATTGG ACACATTATT CCCTTTGCCC TGGTGCAGCA AACCCTGCTC
GCCGCAGACC TAGCCAGGCT GAACGCCAGG GAAGCCCGCT TGAGTGAACT CGCGGCAGAG
TATGAATCCT TGCTGAATGA GCTGAGCGAG GAGGATAAGG ACAAGCCCTT TGTCAATGAT
GAGGGCGACG CCTTTGTGCC GAAAGAGGTT GCAAAGGCCA TCAAGAGCAT GGAGGTTGAG
CCGGAAACGC TCGCCGTCCT GCGAAAGGTG AACGCCCTGA ATAATGAGGA AAAATCCCTC
AAGAAACAAA TCAAGGCGGA CAGTACCGCG CTCCACCTCC TCACCAAAAA GACCATTGAG
GAATTGACGG ATGAGCAGGC AAGGCAAATG ATTAAGCTCA AGTGGATTCC TCCCGTGCTG
GATAGCATGG CCGGGTTGCC CTCCGCTGTC ATTGCCGATT TCATTGCCCG ACTCCTTGCT
TTGGCTGGGA AATATGAAAC GACATTCACG GAGGTAGACA GCCAAATCGC TGAGACAGAG
TCCTCTCTCG TATCGCTTTT GGATGAATTG ACCGGCAACG AGTTCGATAT GCAGGGCATT
CAGGAACTCA AATCCCTGCT CGGAGGAAGC GCCCATGAAT GA
|
|---|
| Protein sequence | MNKQQLASKI WESANKMRSK IEANEYKDYI LGFIFYKFLS DKEVKFLKEN DWTDDDLPHV
TEDDAETVDY IRSNVGYFIS YKHLFSTWID KGSDFNAADV TEALSAFSRL INPSHKKVFD
KVFATLETGL SKLGENSGAR TKAIRDLLHL IKDIPMDGRQ DYDVLGFIYE YLISNFAANA
GKKAGEFYTP HEVSLLMSEI VAAHLKDRQQ IKIYDPTSGS GSLLINIGKC VARYMGGGDN
IKYYAQELKE NTYNLTRMNL VMRGILPNNI VTRNGDTLEE DWPYFDDNDP VNTYDPLYVD
AVVSNPPYSQ SWNPADKESD PRYRFGLAPK GKADYAFLLH DLYHLKPDGI MTIVLPHGVL
FRGGTEGAIR RNLVEYNHID AIIGLPANIF FGTGIPTIIM VLKQKRENTD VLIVDASKGF
AKVGKNNVLR ACDIKKIVDV VSARADVEKF AKVVSLDEIR GNDYNLNIPR YVDSSDKNER
WDIFATMFGG IPLSELADFH EYWAAFPHLK DALFTASGEA HCRLNVANLK SSVLDAADVT
AFTARYASSF ADFEAFLTTR LLDGMETLNI TREKSIISDD VFSRLNGLPL IDKYKAYQLL
DDEWKKIAVD LEIIRTEGFA SSKQVDPNMV VKTKDGKKQE VQDGWIGHII PFALVQQTLL
AADLARLNAR EARLSELAAE YESLLNELSE EDKDKPFVND EGDAFVPKEV AKAIKSMEVE
PETLAVLRKV NALNNEEKSL KKQIKADSTA LHLLTKKTIE ELTDEQARQM IKLKWIPPVL
DSMAGLPSAV IADFIARLLA LAGKYETTFT EVDSQIAETE SSLVSLLDEL TGNEFDMQGI
QELKSLLGGS AHE
|
|---|
| |