| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1890 |
|---|
| Symbol | |
|---|
| ID | 6275348 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2296573 |
|---|
| End bp | 2297409 |
|---|
| Gene Length | 837 bp |
|---|
| Protein Length | 278 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642613951 |
|---|
| Product | Undecaprenyl-diphosphatase |
|---|
| Protein accession | YP_001878485 |
|---|
| Protein GI | 187736373 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1968] Uncharacterized bacitracin resistance protein |
|---|
| TIGRFAM ID | [TIGR00753] undecaprenyl-diphosphatase UppP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 76 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTC TGGAAATTAT TATCCTGGGC ATTGTGGAAG GCCTGACCGA ATATTTGCCG
GTCAGCTCCA CGGGCCACCT GCTCCTGACG GAATCCCTGC TGAACATGTC CCAGAGCAAG
GAAGCTCTGG ATGCCCTGGC CGTCTGCATC CAGGGGGGAG CCATCCTGGC GGTGCTGAGC
CTGTATTTTC CGCGGGTAAA GGCCATGGCG CAGGGCATGC GCGGCAATAA CCCCGCCGGG
CTGAAACTGC TGGTCAACCT CATTCTGGCC TTCCTTCCCG CCGCCGTGGT GGGCCTGTGC
TGCGCTTCAC TGATTAAGGA ATATCTGTTC AACACATATA CGGTGGCTTA TTCATGGATC
GTAGGGGGAG GCGTTATTCT GGCGTATTGC GCCTGGCGCG CCAGGGAGGG CCGTTCCAAT
GAAGGGGACT CCGGCGCCTC CATTGAAAGC CTGACGCCAG CCAAGGCGCT GACGGTGGGC
GCACTCCAGT GCGTGGCCAT GATCCCCGGC ACCAGCCGGA GCCTGATGAC CATGCTGGGA
GGCATGTTTG TGGGGTTAAG CGTGGAAGCG GCCGTGGAGT TCAGCTTTTT GCTGGGATTG
ATTACCCTGG GCGCGGCCAC GGTCCATGAT GCGTATAAGG ACGGAGCTCT GATGCTGGAA
TCCTTCGGGT GGGAAGCACT TGCCGTGGGG ACGGCGGTCA GCTGGCTTTC CGCATGGCTG
GCTGTAAAAT GGATGGTATC CTATCTGCAA AGGCACAGTT TTTCCGTATT CGGATGGTAC
CGCATCGCCA TTGGTATCGT GACGCTGGTT CTCCTGTCCA TGGGGCTGGT GCATTGA
|
|---|
| Protein sequence | MNILEIIILG IVEGLTEYLP VSSTGHLLLT ESLLNMSQSK EALDALAVCI QGGAILAVLS
LYFPRVKAMA QGMRGNNPAG LKLLVNLILA FLPAAVVGLC CASLIKEYLF NTYTVAYSWI
VGGGVILAYC AWRAREGRSN EGDSGASIES LTPAKALTVG ALQCVAMIPG TSRSLMTMLG
GMFVGLSVEA AVEFSFLLGL ITLGAATVHD AYKDGALMLE SFGWEALAVG TAVSWLSAWL
AVKWMVSYLQ RHSFSVFGWY RIAIGIVTLV LLSMGLVH
|
|---|
| |