| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1889 |
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| Symbol | |
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| ID | 6275450 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | + |
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| Start bp | 2295502 |
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| End bp | 2296548 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 642613950 |
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| Product | Sec-independent protein translocase, TatC subunit |
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| Protein accession | YP_001878484 |
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| Protein GI | 187736372 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.824369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 76 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCTGA GGATGGCTCT GTGCCTGACC GTCAGCACAA TTCTGTGCGC CGGGTTTGCG
TCCAATCTGA TGGACATCCT GAGGCGTCCC GTCAACCAGG TGTGGGATAT GTTTGAAGAA
TCCCATCTTC CGGCAGGGAT TGGTCTGGAT GCCTGGAGTA AGGCCAAGGA AATGGCAACG
GCCATGACGA GCCTGGGAGC TTCCCAGCGG GCATTGTTTC TCCGCCAGGT TTCCCCGTCC
CAGGCAGATT TGACGGAGGC TGCCCTGGTT CTTCGCGGCG CGCAGCCGCT GCCGGAGGAC
AGGAAGCAGG TTTTCATCAG GGAAGGCAGC CCCTCCACGG CCGTGAGGGA TCTGGCGGAA
GCCCTGTATT CCAAAGGAGC CGTGCTGGCA GACGGAACGG GGCGGGGGGC CCTCAAGATG
ATGAGCGCGT TCCAGCCCGG GGAGGCGTTT ATGCTGACCA TCAAGCTTTC CCTGTATGCC
GGAGTGGTCA TTTCCTTCCC GCTTCTGTTG TACTTCCTGC TGCAATTCAT CATTCCGGGG
CTGCTGGAAC ATGAACGCAA GCTGCTGTAC AAGTGCATGG CTGTCGGCTT CGGTCTCTTC
CTGGCCGGGA CGCTGTTTTG TTACTTCATC GTCCTCCCGC GGGTATTGAC GTTTTTTTAC
ACCTATTCCC TGGAATTCGG CATCTCCAAT GAATGGCGCA TCGGCTATTA CCTGTCCTTC
GCCACGCAGA TGATTTTAAT GTTCGGACTG GCTTTTGAAT TGCCTGTGGT AGTGATGCCC
TTCGTCAAGC TGGGGGTGCT GACCTATGAC ATGATGAAGT CCACGAGACG CTATGCCATT
GTGGCTATCG CCGTCCTGGC CGCGGTTATC ACCCCTACGC CGGATGTAGC TACCATGATG
CTGATGGCCG TTCCCATGTA TGCGCTGTAT GAAATATGCA TCATTCTGGC CTGGATGCAT
GAACGCAAGG AGGCCGCGCG CACCCGGGAA GAAATCGCCC GGTTTGAAGA AGATTTCAAC
AACAACAATT CTCCCTACAA CCAGTAA
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| Protein sequence | MLLRMALCLT VSTILCAGFA SNLMDILRRP VNQVWDMFEE SHLPAGIGLD AWSKAKEMAT
AMTSLGASQR ALFLRQVSPS QADLTEAALV LRGAQPLPED RKQVFIREGS PSTAVRDLAE
ALYSKGAVLA DGTGRGALKM MSAFQPGEAF MLTIKLSLYA GVVISFPLLL YFLLQFIIPG
LLEHERKLLY KCMAVGFGLF LAGTLFCYFI VLPRVLTFFY TYSLEFGISN EWRIGYYLSF
ATQMILMFGL AFELPVVVMP FVKLGVLTYD MMKSTRRYAI VAIAVLAAVI TPTPDVATMM
LMAVPMYALY EICIILAWMH ERKEAARTRE EIARFEEDFN NNNSPYNQ
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