Gene Amuc_1886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1886 
Symbol 
ID6274724 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2290846 
End bp2291256 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID642613947 
Product7-cyano-7-deazaguanine reductase 
Protein accessionYP_001878481 
Protein GI187736369 
COG category[R] General function prediction only 
COG ID[COG0780] Enzyme related to GTP cyclohydrolase I 
TIGRFAM ID[TIGR03139] 7-cyano-7-deazaguanine reductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACG ACCATCTGAC TCTATTAGGC TCTCAAAGCT CCTTCTTTAC CAATCCCGAC 
GACGCCAGGC TGGAATCCTT CCCTAACCGC GGCACGCGTC CCTACACCAT CACGCTGGAC
ACCCATGAAT TTTCCTCCCT CTGCCCCGTT ACCGGTCAAC CGGATTCCTG TCACCTGACG
ATCACCTACG TTCCGGCGGA AAAGTGCGTG GAAACCAAAT CTCTCAAATA CTACCTGGCC
GCCTACCGCA ACTATCCGGC TTTTAATGAA CAAATCGTCA ACCGCATCAC GGATGATCTG
GTGGCCGCCA TTTCCCCGCG GTGGCTGAAG GTGGAAGGCC GCTTCTCCCC CCGCGGCGGC
ATCCAGCTGA CCGCAACAGC CGAACACAAT CCGGAAAACC GCCCCCTGTA A
 
Protein sequence
MSDDHLTLLG SQSSFFTNPD DARLESFPNR GTRPYTITLD THEFSSLCPV TGQPDSCHLT 
ITYVPAEKCV ETKSLKYYLA AYRNYPAFNE QIVNRITDDL VAAISPRWLK VEGRFSPRGG
IQLTATAEHN PENRPL