| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1880 |
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| Symbol | |
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| ID | 6274492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Akkermansia muciniphila ATCC BAA-835 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010655 |
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| Strand | - |
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| Start bp | 2285299 |
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| End bp | 2286546 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642613941 |
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| Product | isocitrate/isopropylmalate dehydrogenase |
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| Protein accession | YP_001878475 |
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| Protein GI | 187736363 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0538] Isocitrate dehydrogenases |
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| TIGRFAM ID | [TIGR00183] isocitrate dehydrogenase, NADP-dependent, prokaryotic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAATT TAACATTCAC CCCTCCCGCG GACGGTGCAG CCGTCACCAT GCAGAACGGC
AGGCTTTGCG TTCCGGACAG GCCCGTCATT CCCTTCATCA TCGGTGATGG AACCGGTCCT
GAGATATGGG CGGCGGCCTC CCGTGTCATT GACGCAGCCG TAGCCAAGGC TTATCAGGGC
AGGCGTTCCA TCGCATGGTA TGAAGTTTTT GCCGGGCAGA AATCTTTTGA CAATCTGGGC
ACCTGGCTTC CGAATGAAAC GGTGGAAGCT TTCCGCACGT ACCTCATCGG CATCAAAGGC
CCCCTCACCA CTCCGGTGGG CGGAGGCATC CGCAGCCTGA ACGTCACGCT GCGGCAGGAT
CTGGATCTGT TTGTCTGCCT GCGTCCCGTG CGCTATTTCA ACGGCATTGA AACTCCCGTC
AAAGCTCCGG AAAAAGTGGA CATGGTCGTT TTCCGCGAAA ACACGGAAGA CATCTACGCC
GGAATCGAAT TCAAGGAAGG CACGGAGGAT GCCAAGCTGT TTTTTGATAC CATGAGCCGC
ATTTTCCCGG ACCGCATGAA AAAGGTTCGT TTCCCGGAAA GCTCCGGCTT CGGCATCAAG
CCCGTTTCCC GTGAAGGCAC GGAGCGCCTG GTGCGCGCCG CCATTGACTA TGCCGTGAAA
AACGGAAGGA AAAGCGTCAC GCTGGTGCAT AAGGGCAACA TCATGAAATT CACGGAAGGC
GGCTTCCGTG ACTGGGGATA CGATGTCGCA CGGCGGGAAT ACGGCGCCCT CCCCATAGGG
GACGGCCCCT GGCTGAAACT TCCCAACGGT ATCGTTATCA AGGACTGCAT TGCAGACGCC
TTCCTTCAGG AAATTCTGCT CCATCCGGAA AACTTCGACG TGGTAGCCAC GCTGAATCTG
AACGGGGATT ACATCTCCGA CGCCCTGGCG GCGCAAGTCG GCGGCATCGG AATCGCCCCC
GGAGGCAACA TCAACTACCT GACGGGGCAT TCCATTTTTG AAGCTACGCA CGGCACCGGG
CCGAAACTGG CCGGACTGAA CAAGGCCAAC CCCAGCTCCG TCATCCTGTC TGCGGAGATG
ATGTTGCGCT ACATGGGCTG GACGGAAGCC GCCGATCTGC TGATTCAGGC CATTGACCGG
GTGATTTCCG AAAAAACGGT TACGTTCGAC CTTGCGGAAA TGATTCCCGG TTCCACGGAA
CTTACCTGCT CCGCTTACGG CGACAAACTG GTGGAAACCC TGAGCTGA
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| Protein sequence | MANLTFTPPA DGAAVTMQNG RLCVPDRPVI PFIIGDGTGP EIWAAASRVI DAAVAKAYQG
RRSIAWYEVF AGQKSFDNLG TWLPNETVEA FRTYLIGIKG PLTTPVGGGI RSLNVTLRQD
LDLFVCLRPV RYFNGIETPV KAPEKVDMVV FRENTEDIYA GIEFKEGTED AKLFFDTMSR
IFPDRMKKVR FPESSGFGIK PVSREGTERL VRAAIDYAVK NGRKSVTLVH KGNIMKFTEG
GFRDWGYDVA RREYGALPIG DGPWLKLPNG IVIKDCIADA FLQEILLHPE NFDVVATLNL
NGDYISDALA AQVGGIGIAP GGNINYLTGH SIFEATHGTG PKLAGLNKAN PSSVILSAEM
MLRYMGWTEA ADLLIQAIDR VISEKTVTFD LAEMIPGSTE LTCSAYGDKL VETLS
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