| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amuc_1876 |
|---|
| Symbol | |
|---|
| ID | 6275511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Akkermansia muciniphila ATCC BAA-835 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010655 |
|---|
| Strand | + |
|---|
| Start bp | 2280722 |
|---|
| End bp | 2283049 |
|---|
| Gene Length | 2328 bp |
|---|
| Protein Length | 775 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642613937 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001878471 |
|---|
| Protein GI | 187736359 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGAACC GTACCGCCGC CGTTTTTTTT CTGTTTTCCC GCCGTCCGGG CGAGTATCTC
CCCCTGTTCT GGCTGACAGG GGCTTTCGTG CTGGGTTTCC TGTGGTCGCT GGCGTACGCT
TCCGGTCTGG TGGCGGAGGA GCCTTTGCCG TGGCCGGCCG GCCGCCTCAT GTTCGCATTC
TACGGCATGC TGGTGTACGG CTGGGCCCTC CCCGTCCTGT TTTCCTTTGC GGCGGGAAGC
AGGAGCCGGT GGATGAAACC CGTAGAATGG CTCTGGCATG CCTGCGTTGC GTTGGGGTTG
GCGACTATTG CCGCGGGAAA TGGGAGCGGC GTGCTCCTGA TGCCTTTTGA CTGGTGGGTT
TGCCCGGTTT TTGCCTTCCT TGCCGCAGGG GCGGCGTGCG TCGCATGGTT CCGTCCGTTT
CCGTGGACTG TACGGCTGTT GTTCAGTTCC TCCGCCGGGT GTGTGGCCGC GGCCCTTTGG
GCGTTGGGAC ATACGCAGGC ATTGTCCATG AATGGCCTGC TGGATGTTTC CGCCCTGGGA
GGAAGCCTGT CCTGCGGGCT GATGTTTGCC GCCCTGGGAG CGGCGGCGCT CCGCCTGGAT
ATGGCGCTGG GGAGGGCAGC CGGAATCCTG TCCGTCTGGA TGGCCCTGGT GCTGGCGGCG
GCTCCGGTGA TTGGCGGGCT GGGGGGGCTT CAGGGGGTTC CCGTGCCGTG GATGTTGGTG
GAGGCCGGTA CCGCCTGGTT TTGGTGCGCC GTTCTTCCCG CCGTCCTGGC GGTGGCGCGT
TTTTGGATAA AATCCGGTAC GAAGACCGGA ATATGGGTGA AGACCGGAGT TTCCCTGCTT
GCCTTGCTGG CGGCATGGAA CGTGTTTGTT GTGGGTGCGC CTGAGCTGAT GCAGTTTTCC
CTGTCTGCAT GGCATGAACC GGAATTATGG ATTCTGCTGG GGGCCGGAGT TTTGATGATG
GCAGGGGGGA AGGCCCCCGG ACATTTCCCT GCGGCATGGC GGCTGTTGGG CGCAGGCGTC
TGCGGCGTGC TTCTGGCGTA TGCCGTGGGC GTGCTTGCCG CCCTGGATGT CCAGGCTTTT
CCTGAGGCCC GTCGCGCGGA GCTGATGAGC GGCTGGGTGG GCATGGCTGC CTGCATCCAC
GCCGTAGCCA TGGCTTTTTG CCTGGCGGGC AGCCTCTGCC TGTGGCGGCC AGCGGGAGCG
GAAGACGGAG GCCGGGAGTC TTCCCCTCCG TTTTTGCGGC GTTTCTTCTT CATTTCAGCC
GTAGCGGCGG CTTTGGCGCT GGCGACGGCT GCGGCCGTTG TTCTGCATGC TCCGCCTCCG
GATACCATGG AGGTTAGGAG GCACGTTCAT GATGCGGAAG GTTCCGGCAT TTACGCCGCA
GAGGGGTGTG CCCTGTGCCA TACCCAGATT ATCCGGCGTT CCCTGTCCGG AAAGGACTGG
CAGACGGCGA TTGACCGCGG CACGGATCCT GATTTCCCCT ACCGGGTCAG TGAACCGGAA
GACATGGATG CCGAATTCAA CAGGGAAGGG GCTCCGCAGG CGGGCGTGGC GGCCATAGGC
CCGGACCTGA GCAATGCGGC GGAATACGCC GCCGGGAGGT TGGAATATGA AGACGCCGTA
TCCGGCGGCA CGCGCCGCGC CGCGCAGGTG CGGGAATGGC TGGCCCTGCA TCTTTACAAC
CCGCGGGAAT TGCAGTTCAA CAAGCCCTGG ACCATGTGTC CGGCCATGCC CGGACTGTTT
GAGGAACGCC CGGTGGAAGG GAACGCCCCC TCCACGGCTG CCCTGCCTGT CCGGATGGAA
CGGGGCCGGG AGCTGGTGCC TTCCCCGCGC GGGGAGCGCC TGTTGAACTA CCTGGAGTCC
CTGCGGAGGG TGGAACCCTC CCTGAAGCGC GACCAAATCC ATTCCTTCCC GGCCCTGTCC
CATATTCACC CGGATTATGC CGCGCATCCT CCCGCCGTGG ACATGGAACG CCTGAAGAAA
GCCCGCGCCG CCGCCGTGAT GGAAAAGGGC AGGGGCGTAT ACCTTTCCAA ATGCGCCATC
TGCCACGGCA ACGACGGCAT GGGGGACAAG GTGACCTATC CTCCCCTGGC CGGGTCCGAG
TGGCTGAAGG AAAAGCCTGA TGTGGAAATC GTCAGGATCA TCCTCCAGGG ACTGACCGGA
CCCATCACGG TGAATGGAAA GGAATGGGAT TCCACCATGC TGCCGCCCGG CGTCACGGAT
TCCCGCGACC TGGCGAACCT GCTCACATTC CTGCGCCGCC AGTTCGGCGG GGTGGAGAAG
GCGGCCTATA CGCCGGAGCA GGTGGACGCC ATCCGCCGGG ATCTGTGA
|
|---|
| Protein sequence | MMNRTAAVFF LFSRRPGEYL PLFWLTGAFV LGFLWSLAYA SGLVAEEPLP WPAGRLMFAF
YGMLVYGWAL PVLFSFAAGS RSRWMKPVEW LWHACVALGL ATIAAGNGSG VLLMPFDWWV
CPVFAFLAAG AACVAWFRPF PWTVRLLFSS SAGCVAAALW ALGHTQALSM NGLLDVSALG
GSLSCGLMFA ALGAAALRLD MALGRAAGIL SVWMALVLAA APVIGGLGGL QGVPVPWMLV
EAGTAWFWCA VLPAVLAVAR FWIKSGTKTG IWVKTGVSLL ALLAAWNVFV VGAPELMQFS
LSAWHEPELW ILLGAGVLMM AGGKAPGHFP AAWRLLGAGV CGVLLAYAVG VLAALDVQAF
PEARRAELMS GWVGMAACIH AVAMAFCLAG SLCLWRPAGA EDGGRESSPP FLRRFFFISA
VAAALALATA AAVVLHAPPP DTMEVRRHVH DAEGSGIYAA EGCALCHTQI IRRSLSGKDW
QTAIDRGTDP DFPYRVSEPE DMDAEFNREG APQAGVAAIG PDLSNAAEYA AGRLEYEDAV
SGGTRRAAQV REWLALHLYN PRELQFNKPW TMCPAMPGLF EERPVEGNAP STAALPVRME
RGRELVPSPR GERLLNYLES LRRVEPSLKR DQIHSFPALS HIHPDYAAHP PAVDMERLKK
ARAAAVMEKG RGVYLSKCAI CHGNDGMGDK VTYPPLAGSE WLKEKPDVEI VRIILQGLTG
PITVNGKEWD STMLPPGVTD SRDLANLLTF LRRQFGGVEK AAYTPEQVDA IRRDL
|
|---|
| |