Gene Amuc_1873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmuc_1873 
Symbol 
ID6274740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAkkermansia muciniphila ATCC BAA-835 
KingdomBacteria 
Replicon accessionNC_010655 
Strand
Start bp2278277 
End bp2278837 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content62% 
IMG OID642613934 
Producthypothetical protein 
Protein accessionYP_001878468 
Protein GI187736356 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.152497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value0.709122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGC CCGTCATTTC CGGCTGGGTG CTTTCCTTCG GTTCGGAGAA GGCGCTCCTT 
CAGGCCGTCC GCGTGCTGGT GAAGGAGGAA AATCTGCGCT GGGAGGTTTG CGCACCTTAC
CCCTGCGCCG CTGTTCGTTT TGCCAACAGG CACGCCGGGA AGGCCGTGGG AGCAGGCGTT
CGGCTGTGGG CCGCAGCGGG CGGCGTCTGC GGGTTTCTGG CCGTGGCTCT GTGGCTTTAC
TGGACGCAGT TCTGTGCGGA TCCCCTTGTG ACCCAGGGAA GGGTCCAGGG CTGGGACAGC
TGGCCCGCAT ATGTCCCTCC CCTGTTTGAA GGAACTTTGC TGGGGGCCGG ATTGCTGACC
GCCGCCGGTT TTCTGAAGGG GGCTCTTCTC CCGCAATGGC ACGACTGGGC GTTCGAGTGT
GATTTTTTCA GGACGGATGA GCACGGGAAC GGTTACTTCA TTCTGCTGGA AGGCGGGAGC
GAAGGCTATG CCGCCGTTTT GGCTGAAGCC CTGCATCCGG ATGCCTGCGA GTACGTTCAT
GGGAAAGGAG GCCGGGCATG A
 
Protein sequence
MKKPVISGWV LSFGSEKALL QAVRVLVKEE NLRWEVCAPY PCAAVRFANR HAGKAVGAGV 
RLWAAAGGVC GFLAVALWLY WTQFCADPLV TQGRVQGWDS WPAYVPPLFE GTLLGAGLLT
AAGFLKGALL PQWHDWAFEC DFFRTDEHGN GYFILLEGGS EGYAAVLAEA LHPDACEYVH
GKGGRA