Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1858 |
Symbol | |
ID | 6275469 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2259751 |
End bp | 2261733 |
Gene Length | 1983 bp |
Protein Length | 660 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642613919 |
Product | hypothetical protein |
Protein accession | YP_001878453 |
Protein GI | 187736341 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.153141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 0.576375 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAAA GGTCTTATTA TTTCAATGAC CTACAGTCTT TTTGTACCCA AACTCTAGAA GAAATTTTAG GGCAGATTGC TCTTCATACC CCATTTTCTT TAGATCAAAA TTCACGTAAT TCTTTTGTTC ACGAAATTAG ATTACTCCAA AGTGTTCTTA AAAGTATTCC CTCTGGATCC ATAGCCCTTG AATACACTAT TCCTCGCATC GGAGAGCGAA TAGATGTCGT AATCGCTTGT GCTGGTATTC TCTATATTCT TGAATTTAAA GTAGGAGAAT CATCTTATCC AAGACATGCT ATTGATCAAG TGGTAGATTA TGCACTAGCA TTAAAATATT TCCATCAAGA AAGTTATCAA AAGAAAATTG TTCCTCTGGT AGTCTGCACT CATGCTCCTT CTAAAGAGTT TCAACTTATA ATGAACCCAG ATGGGGTTTA TCTTCCTATC CTTTGCAATG ATAATACCTT AGGTCCTAAT TTAACAAAAC TTACTAACAA TCTGTGTGAT GACGAATTCC ATTTTAAACA ATGGTTAATT TCGCCATACA TGCCTACTCC CACGATCATT GAAGCAGCTC AAGCACTCTA CCGTGGACAT GGAGTCAAAG AAATTTCACG GAGTAGTGCC GGAGCCTACA ATCTTAGTCT CACAACAAAG GTACTAAATC GTATTATTGA ACAAAGTAAA CAGTATCATC AAAAATCTAT TTGTTTTGTT ACTGGCGTAC CTGGTGCCGG AAAAACGCTA GTAGGCCTCA ATATTGCAAA TGAGCGACAT CAATATGATA AACAAGAACA TGCAGTTTTT CTTTCCGGTA ATGGTCCCTT GGTTGCTGTC CTGCGAGAAG CTCTAGTACG AGATGAAATT AAACGCTGTA AAGGCAAAAT AACAAAAATA ACATCTAAAA GAAAAGTTGC TGCCTTTATT CAAAATATCC ATCATTTTCG TGATACTTAT CTACCTCCTT CCGAACAAGT TCCTGCGGAA AAAGTAACTA TTTTTGACGA AGCACAACGT GCTTGGACAA AAGAGCAAAC GGCTAAATTT ATGTTAAAAC GCCATGTTCC CTCCTGGAAC ATGTCTGAAC CAGAATTCCT CATTAGTGTA ATGGATCGCC ATCAAGATTG GGCTGTAATC ATTTGTCTAA TTGGAGGTGG TCAAGAAATA CATACTGGAG AAGCTGGCCT TTTAGCTTGG TTTGATGCAC TAAGAAACCA TTTCCCTCAT TGGAATGTTT ATGTGTCCCC CCAAATCTCT GATGTAGAAT ATACGCAAGG AAAAACACTT GAATCTCTCT TTATGGGATT ACATCTTTAT CAGGAAAAAA AACTTCATCT TTCTGTCTCA CTTCGTTCTT TTCGGAATGA AAAAGTTTCA GCATTTGTAA AATCTCTATT GGATGAAAAC TTACCAATAG CTCAACAACT CTATTCAGAA CTCTCACTTA ATTATCCTAT TGTCATTACA CGTAGCCTAG AAAAAGCTAA ACAATGGGTA CAAAATCAAT CCCGAGGTAC AGAACGTTAT GGACTCATTT CTAGTTCAGG AGCCAAACGT CTACGCCAAT TTGGTATTTG GGTACAGAAC GATATTCAGG CAGAAAATTG GTTTTTAAAC GATAAAGAGG ATGTACGCTC TTCCTATTTT CTAGAAGAAA CAGCAACTGA ATTTGATATT CAGGGTCTTG AAATTGATTG GGCAATCGTT GCATGGGATG CAGACTTTCG TATAGAAAAA GGACATTTTA AAGCTTATAA TTTTAAGGGG TCTAGTTGGA AAATAGTTCG TAAGAAAGAT GCACAACTCT ATCTCAAAAA TACTTACCGT GTTTTATTAA CACGAGCACG CCAAGGGTTC GTTATTTTTA TTCCAAAAGG ATGTGACGAG GATTTGACTC GTCACTCCTC CTTCTATGAT GGTATTTATT ATTACCTAAA AGAAATAGGT ATCAAGGAGC TATGCCTTTC TGAAGAACAA TAG
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Protein sequence | MIQRSYYFND LQSFCTQTLE EILGQIALHT PFSLDQNSRN SFVHEIRLLQ SVLKSIPSGS IALEYTIPRI GERIDVVIAC AGILYILEFK VGESSYPRHA IDQVVDYALA LKYFHQESYQ KKIVPLVVCT HAPSKEFQLI MNPDGVYLPI LCNDNTLGPN LTKLTNNLCD DEFHFKQWLI SPYMPTPTII EAAQALYRGH GVKEISRSSA GAYNLSLTTK VLNRIIEQSK QYHQKSICFV TGVPGAGKTL VGLNIANERH QYDKQEHAVF LSGNGPLVAV LREALVRDEI KRCKGKITKI TSKRKVAAFI QNIHHFRDTY LPPSEQVPAE KVTIFDEAQR AWTKEQTAKF MLKRHVPSWN MSEPEFLISV MDRHQDWAVI ICLIGGGQEI HTGEAGLLAW FDALRNHFPH WNVYVSPQIS DVEYTQGKTL ESLFMGLHLY QEKKLHLSVS LRSFRNEKVS AFVKSLLDEN LPIAQQLYSE LSLNYPIVIT RSLEKAKQWV QNQSRGTERY GLISSSGAKR LRQFGIWVQN DIQAENWFLN DKEDVRSSYF LEETATEFDI QGLEIDWAIV AWDADFRIEK GHFKAYNFKG SSWKIVRKKD AQLYLKNTYR VLLTRARQGF VIFIPKGCDE DLTRHSSFYD GIYYYLKEIG IKELCLSEEQ
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