Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amuc_1832 |
Symbol | fucI |
ID | 6275647 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Akkermansia muciniphila ATCC BAA-835 |
Kingdom | Bacteria |
Replicon accession | NC_010655 |
Strand | - |
Start bp | 2225331 |
End bp | 2227109 |
Gene Length | 1779 bp |
Protein Length | 592 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642613896 |
Product | L-fucose isomerase |
Protein accession | YP_001878431 |
Protein GI | 187736319 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2407] L-fucose isomerase and related proteins |
TIGRFAM ID | [TIGR01089] L-fucose isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.275484 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 66 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAG CATTACCAAC CATCGGTATC CGCCCCACGA TTGACGGTCG CCGCCTCGGC GTCCGGGAAT CCCTGGAAGA TCAAACCATG AACATGGCCA AGGCGGCCGC CGCCCTTATT GAGGCCAACA TCCGCCACGC CTCCGGAGAA CCCGTCAAGT GCGTGATCGC GGACACCTGC ATCGGCGGCC CGGCGGAAGC CGCCGCCTGC GCGGACAAAT TCAAGGCCAA CAACGTCGGC GTCTCCCTGG CCGTTACGCC CTGCTGGTGC TACGGCAGTG AAACATTTGA CATGGATCCG TTCACTCCCA AGGCCATCTG GGGCTTCAAC GGCACGGAAC GCCCCGGCGC CGTGTATCTG GCCGCTGCGC TGGCCGGCCT GAACCAGAAA GGATTCCCGG CTTTCTCCAT CTACGGAAAA GACGTGCAGG ACGCCACGGA TACTTCCATC CCGGAAGACG TAGCTGAAAA AATCCTGCGC TTCTGCCGCG CCGGTCTCGC CGTAGCCACC CTCCGCGGAA AAGGCTATCT TTCCATCGGC GGCTGCTCCA TGGGCATTGC CGGTTCCATT GTGGACCAGT CTTTCTGGGA AAATTACCTG GGCATCCGCG TACAGGCCGT GGACATGACG GAAGTGCGCC GCCGCATGGA CCAGAAAATT TATGACGAAG CGGAATTCGA CCTCGCCATG CAATGGGCGG ATTCCGTCTT TAAATTCGCC GAGGACAAAA ACCGTCCGGA CCTGAAGCTG GATGAAGCCG GACGCCGCAA AACCTTCAGG GAAAGCGTGC TGATGGCCAT GATCTTCCGC GACATGATGC AGGGCAATCC CAAGCTCAAG AAAATCGACC GCGAAGAAGA ATCCCTGGGT TACCAGGCCA TTGCCGGCGG CTTCCAGGGC CAGCGCCACT GGACGGACTT CTACCCGAAC GGAGACATCG CGGAAACCCT GCTTAACTCC ACCTTTGACT GGAACGGCCC GCGCGCCCCG CTTCCCTTCG CTACGGAAAA TGACTCTCTC AACGGCGCCT GCCTCCTCTT CGGCTATCTG CTGACCGGAC AGGCCAATGT CTTCGCGGAC GTTCGCACCT ACTGGAGTCC GGAAGCCGTA AAGCGCGTCA CGGGTTATAC GCTGGAAGGC CATGCCAAGG ACGGCATCAT CCACCTCATC AATTCCGGCT CCGCCGCCCT GGACGGCTGC ATGGCCTGCA CGGGCAAGGA CGGACAGCCC GTCATGAAAA AACACTGGGA CGTCACCCCG GACGATGCGA AAACCATGAT GGAACAAGCC GTCTGGTGCC CGGCCAACCG GGAATACTTC CGCGGCGGCG GCTACTCCGT CCACTACGTC ACCAGGGGCG GCGCTCCCGT CACCATGATG CGCCTGAACA TCGTCAAGGG ACTCGGCCCC GTCCTCATCG TGGCGGAAGG CTGGTCTGTT GATCTGCCTG CCGAGGTGCA CAAGACCCTG GACGAACGCA CTGACCCGGG CTGGCCGACC ACCTGGTTCG CCCCGCGCCT GACCGGCAAG GGAGCCTTTA CGGACGTGTA CAGCGTCATG GCCAACATGG GAGCCAACCA CGGAGCCTTT ACTTACGGCC ACATCGGCGC AGACATCCTG ACGCTGGCCT CCATGCTGCG CATTCCCGTA TACGCCCATA ACATTCCGGA TGACCAAATC TACCGCCCCT CTGCCTGGGG TCTCCACGGC ACGGCGGATC CGGAAGGAGC TGATTTCCGG GCCTGCGCCA ACTACGGGCC ATTATACGGA AAATACTGA
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Protein sequence | MKTALPTIGI RPTIDGRRLG VRESLEDQTM NMAKAAAALI EANIRHASGE PVKCVIADTC IGGPAEAAAC ADKFKANNVG VSLAVTPCWC YGSETFDMDP FTPKAIWGFN GTERPGAVYL AAALAGLNQK GFPAFSIYGK DVQDATDTSI PEDVAEKILR FCRAGLAVAT LRGKGYLSIG GCSMGIAGSI VDQSFWENYL GIRVQAVDMT EVRRRMDQKI YDEAEFDLAM QWADSVFKFA EDKNRPDLKL DEAGRRKTFR ESVLMAMIFR DMMQGNPKLK KIDREEESLG YQAIAGGFQG QRHWTDFYPN GDIAETLLNS TFDWNGPRAP LPFATENDSL NGACLLFGYL LTGQANVFAD VRTYWSPEAV KRVTGYTLEG HAKDGIIHLI NSGSAALDGC MACTGKDGQP VMKKHWDVTP DDAKTMMEQA VWCPANREYF RGGGYSVHYV TRGGAPVTMM RLNIVKGLGP VLIVAEGWSV DLPAEVHKTL DERTDPGWPT TWFAPRLTGK GAFTDVYSVM ANMGANHGAF TYGHIGADIL TLASMLRIPV YAHNIPDDQI YRPSAWGLHG TADPEGADFR ACANYGPLYG KY
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